| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4017 |
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| Symbol | |
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| ID | 7974582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4261138 |
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| End bp | 4262064 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644794603 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002945897 |
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| Protein GI | 239816987 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCCAC TCGACGATGT TTTCGCCGCC ATGCGAGTGC GCAGCGCGCT GTACGCCCGG
CTTGAGGCCG GCGCGCCCTG GGGCGTGAGC CTGGCTGGCG GAGAGAGCGC GCGTTTCGGA
CTCGTGGTGC GCGGCAGCTG CCTGCTCGAG GCGCCGGGCG TCGCACAGCC CGTGCCCCTG
GCCGCGGGCG ACTGCTACGT GCTCGCGCAC GGCACGCCCT ATGTGCTGCG CGACCACCCG
AACACGCCCA CGGTGAGCTG CGCCTCGGTG GTGCGCGACC GCATCGGCGG CGTGGTCGAG
CTGGGCGGCA CGGGCACCGC GGCCTCGGTG ATCTGCGGCT GGTTCCACTT CGACCAGCGT
GCCGCGCGCC CGCTGCTCGA CCTGCTGCCG GTGCTGCTGC ACGTGAAGAT GGAAGAGGCG
CGCGCCTTGG CTCTGCAGGG CACGCTGCAG CTGCTCGCGA TGGAAACCGG CGAGCCGGGC
CTGGGTTCGG GCCTGCTCGT GAGCCGGCTG GCCGACATCG TGTTCGTGCA GGCGGTGCGT
GCCCACGTGG CGGCCCATGG CGAATCGCAG ACGGGCTGGT TGGCCGCGCT GGCCGACGCG
CGCATCGGCC CCGCGCTGCG CGCCATGCAC AAGGACATGG CGCGCGACTG GACGGTGGAA
GCGCTGGCCT CGACGGCGAG CCTGTCGCGC TCGGCCTTCG CGCAGCGCTT TCGCGAGCGC
GTGGGCCAGG CGCCGCTCGA ATACCTCACG CAGTGGCGCA TGTTCAAGGC CGGCAACATG
CTGGGCCAGG GCCATGCGGC CGTGGGTGCG ATCGCAGGCG CGGTGGGCTA CGAATCGGAA
GCTGCCTTCA GCAAGGCCTT CAAGCGCCGC ATGGGCATGG CACCGGGCGC ATGGCGCGCC
GCGGCGCGCG AGGGCGCTGC CGCCTAG
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| Protein sequence | MDPLDDVFAA MRVRSALYAR LEAGAPWGVS LAGGESARFG LVVRGSCLLE APGVAQPVPL
AAGDCYVLAH GTPYVLRDHP NTPTVSCASV VRDRIGGVVE LGGTGTAASV ICGWFHFDQR
AARPLLDLLP VLLHVKMEEA RALALQGTLQ LLAMETGEPG LGSGLLVSRL ADIVFVQAVR
AHVAAHGESQ TGWLAALADA RIGPALRAMH KDMARDWTVE ALASTASLSR SAFAQRFRER
VGQAPLEYLT QWRMFKAGNM LGQGHAAVGA IAGAVGYESE AAFSKAFKRR MGMAPGAWRA
AAREGAAA
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