| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3975 |
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| Symbol | |
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| ID | 7974540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4218586 |
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| End bp | 4219596 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794561 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945855 |
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| Protein GI | 239816945 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.682713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCTG CCTTTCGCAT TCCGAGCCTT GCCCGTCTTT CAATCGCTGC CGCATGGCTC
GCGGCCATGG CCCTGCAGCC GGCCTCGGCC CAGCCGCTGC CGGCGCGCAA CGGCTTTCCG
TCGCAGCCGG TGAAGTTCGT CTCGCCCTTT CCCCCGGGCG GCGGCAACGA TGCCACAGCG
CGGCTGGTCA CCACGCGGCT GCCGGAGATC ATGGGACAGG CCGCGGTGGT GGACAACCGC
GGCGGCGCGG GCGGCAACAT CGGCGCCAAG TCGGTGGCCG AGGCCAAGCC CGACGGCTAC
ACGGTGCTGA CCTCGCAGGT GTCGATCATG GCGGTGAACC CATCGCTCTA CGCCGCGCCC
GGCTTCGATC CGATCAAGAA CTTCGTGCCG ATCACGCAGA TCAACGCGGC GCCGCTCGCG
CTGGTGGTGG AGGCCAATTC GCCCTACAAG ACCTTTGCCG ACCTGGCCAC GCGCGCCAAG
GCCAGCCCCG GCAAAGTCAC CTATGCCACG CCGGGCAACG GCACGCTCTC GCACCTGGTC
GGCGTGGTGC TGCAAAAGGA CAGCGGCGTG GACATGACGC ACGTGCCCTA CAAGGGCGCC
GGCCCCGCGC TCACCGACCT GCTCGGCGGG CAGGTCGACG TGCTCGTGAC CTCGACCTCC
TCGGTCGCGG GCATGGTGCA GAACGGCAAG CTGCGCGTGC TGGCCGTCAC CAGCCCGCGC
CGCATCGGCG TGTTCGCCAA GGCACCCACG CTCGAGGAGC TGGGCTATGC CAATGCCCGC
TTCGAAGACT GGTACGGCTT CTTCGCGCCG GCCGGCACGC CGCCCGAGCG CGTGGCCTAC
CTGAACGAAG CCATCGTGCG CACGCTGCGC CTGCCCGAAG TGACCAAGCT CGTGAACGAC
GGCGGCAGCG AGGTGGTGGC CAACACGCCC GAAGCCTTTG CCGCGCAGCT GCGCCAGGAC
ATCGACCGCT GGTCGCGCAT CGTCAAGCTT TCGGGCGCCA AGGCCGATTG A
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| Protein sequence | MSSAFRIPSL ARLSIAAAWL AAMALQPASA QPLPARNGFP SQPVKFVSPF PPGGGNDATA
RLVTTRLPEI MGQAAVVDNR GGAGGNIGAK SVAEAKPDGY TVLTSQVSIM AVNPSLYAAP
GFDPIKNFVP ITQINAAPLA LVVEANSPYK TFADLATRAK ASPGKVTYAT PGNGTLSHLV
GVVLQKDSGV DMTHVPYKGA GPALTDLLGG QVDVLVTSTS SVAGMVQNGK LRVLAVTSPR
RIGVFAKAPT LEELGYANAR FEDWYGFFAP AGTPPERVAY LNEAIVRTLR LPEVTKLVND
GGSEVVANTP EAFAAQLRQD IDRWSRIVKL SGAKAD
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