| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3947 |
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| Symbol | |
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| ID | 7970376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4188840 |
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| End bp | 4190177 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644794533 |
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| Product | glycosyl transferase family 2 |
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| Protein accession | YP_002945827 |
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| Protein GI | 239816917 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAG AAGGCCAGAA GGCGCTGCAG CCAATGATTT ACCTGCCCGT ATCGGGCAAG
TTTGTCATTG CGTTGATTGG CGCCAGCGCC TGGATGTGGT TCTCGATATG GGCCGCGGGC
CCCTGGCTGG CCGACCTGAC GGATCGGGTG GGGATGGCCC TGGCCATTTT CCTGGTGTAT
GGCATTGCCG TTGTTCCGGG CTTCATGAAT GCGTTCCTGG CCATCAGCCT GCTGCTGGAC
AGGAGGCCGG CGCATCCCGC GTTGGCCGTC TATCCCCCGA TCTCCATCCT GATTGCCGCC
TACAACGAGG AAGCGTCCAT CGACGAGACG CTGGTCAGCA TCGATCGGCA GAACTACCCG
GGCGAACTGC AGGTGATCGT GATCAACGAC GGGTCCGCGG ACGGCACCTC GCTTGTCGTC
CAGCGTGCCC GGGAACGGTA TCCGTGGCTG ACCTTCCTGG ACCTGGAAAA GAATGGCGGC
AAGGCGCGCG CGCTGAACAT CGGGTTCAAG GAGGTGGCGC ACGACCTGGT CATCACCGTC
GATGCCGACT CCTTCCTCTA CCGTGGCGCT TTGACCAGCA TCGTCGAGCG CTATCGCGCC
GACCCGCCCC ATACGCGGGC CGTCGCAGGA AAGATCCTGG TCCGCAACTC GCGGCTGAAC
TGGATCACCC GCTGCCAGGA ATGGGACTAC TTCCATGGCA TTGCCGCCAT CAAGCGCGTG
CAGTCGCTGT TCCAGGGCAC CCTGGTTGCG CAGGGTGCGT TTTCGATCTA CGACCGGGCC
GCGCTGGTCG AGGTTGGCGG ATGGCCCGAA TGCGTGGGCG AGGACATCGT GCTCACCTGG
GCCCTGCTGA AGGCCGGCTA CCGGGTGGGC CACTGCGAGG ACGCGTGCCT GTTCACCAAT
GTGCCCACCA CCGTCAAGCA ATTGGTCAAG CAGCGCCAGC GATGGGCGCG GGGCATGGCG
GAAGCCTTCA TCAAGCACCC GGGGATCCTG GTCAAGCCGC GCCTGTCGAC CTTCTTCATC
TATTGGAACC TGCTGTTTCC GTGGCTGGAC CTGGCATGCA CCATCGGCTT CATTCCCGGA
ATCATCCTCG CGTTCTTCGG CCACTACTGG ATCGTCGGGA TCATGACCCT CGCGTTGATC
CCGGCCACCT TCGCATTGAG CCTGCTCATG TTCCGGATCG AACGCCGGAT GTTCAGGAAG
ACCGGCCTCG TGGTGCGAAA GAACGTCCAG GGCTTCTTTG TCTACGTGCT GCTGTACAGC
CTGATCCTGC AGCCTGCCAG CGTGCTCGGC TACCTCGATG AACTGTTCAG GAAGCCCAAG
GCCTGGGGAA CCAAATGA
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| Protein sequence | MNEEGQKALQ PMIYLPVSGK FVIALIGASA WMWFSIWAAG PWLADLTDRV GMALAIFLVY
GIAVVPGFMN AFLAISLLLD RRPAHPALAV YPPISILIAA YNEEASIDET LVSIDRQNYP
GELQVIVIND GSADGTSLVV QRARERYPWL TFLDLEKNGG KARALNIGFK EVAHDLVITV
DADSFLYRGA LTSIVERYRA DPPHTRAVAG KILVRNSRLN WITRCQEWDY FHGIAAIKRV
QSLFQGTLVA QGAFSIYDRA ALVEVGGWPE CVGEDIVLTW ALLKAGYRVG HCEDACLFTN
VPTTVKQLVK QRQRWARGMA EAFIKHPGIL VKPRLSTFFI YWNLLFPWLD LACTIGFIPG
IILAFFGHYW IVGIMTLALI PATFALSLLM FRIERRMFRK TGLVVRKNVQ GFFVYVLLYS
LILQPASVLG YLDELFRKPK AWGTK
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