| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3934 |
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| Symbol | |
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| ID | 7970363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4174068 |
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| End bp | 4174547 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794520 |
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| Product | nuclear protein SET |
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| Protein accession | YP_002945814 |
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| Protein GI | 239816904 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2940] Proteins containing SET domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.580231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGCA TGAAAACCCG CAAGCAGACC TCGTCCACGC CCTTCATCCG TGTCGGCCCC
AGCGGCGTGC ACGGGCTCGG CGCCTTCGCG ACGCGCGACC TGCCCGCCCA GGCCTTCCTC
GGCCTCTACG AAGGCCGGCG CTACACGCAG CAGGAGATCG CCGCCAGGAC GTGGAACGAC
CAGCTCACCT ACCTGTTCAC GCTCTCCAAC CAGGAAACGA TCGACGGCGC CAAGGGCGGC
AACGGCACGC GCCACCTGAA CCACGCCTGC GACCCCAACT GCGAAGCGGT CGAGGAGTAC
GACGAGGCGG GCGAGTTGAT GCTCAAGTTC CAGACCCTGG TTGCCGTGGA TGCCGGCGAC
GAGCTGTTCA TCGACTACTC GCTGACGGCG GACGACGGCT CGACCGCCGA CAAATACCCC
TGCCACTGCG GCTCGCCCCA CTGCCGCGGA ACGATGCTGT CCCCGGCCGA GGCCGACTGA
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| Protein sequence | MSGMKTRKQT SSTPFIRVGP SGVHGLGAFA TRDLPAQAFL GLYEGRRYTQ QEIAARTWND
QLTYLFTLSN QETIDGAKGG NGTRHLNHAC DPNCEAVEEY DEAGELMLKF QTLVAVDAGD
ELFIDYSLTA DDGSTADKYP CHCGSPHCRG TMLSPAEAD
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