| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3921 |
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| Symbol | |
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| ID | 7970350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4160488 |
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| End bp | 4161828 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644794507 |
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| Product | Hydroxypyruvate reductase |
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| Protein accession | YP_002945801 |
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| Protein GI | 239816891 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2379] Putative glycerate kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.152569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAT CTAACCCTTC CTTCGGCCCC GCACCCGATC CGCGCGAAGC GCCGCGCGCC
TTCCTCGAAC ATCTCTACCG CGTGGCAGTG GATCGCGCGC TGCCGCTGTC CACGCTGGGC
GCGCACCTGC CCAAGCCGCC CAAGGGCCGC ACGCTGGTGC TGGGCGCAGG CAAGGCGGGC
GGCTCGATGG TGCAGGCGCT CGAGGCCCTG TGGCCGGCCG ATGCGCCGCT GTCGGGCCTG
GTCGTCACGC GCTACGACCA CGTCCCGCCG CGCCCCGAGG GCGTGCCGCA GCGCATCGAA
CTTGTCGAGG CCGCGCATCC GGTGCCCGAT GCGGCCGGGC AGCAGGCGGC GGCGCGCATC
CTCGCGCTCG CGCAAGGCCT CACGGCCGAC GACCTCGTGC TGTGCCTGAT CTCGGGCGGC
GGATCCTCGC TGCTCGTCTT GCCGGCCGAG GGCCTCACGC TCGAGGACAA GCAGCGCATC
AACAAGCAGC TGCTCGACAG CGGGGCCGGC ATCGGCGAGA TGAACTGCGT GCGCAAGCAC
CTCTCGCGCA TCAAGGGCGG CCGTCTGGCG GCGGCCTGCG CGCCGGCGCG CGTGGTCACG
CTCACCATCA GCGACGTGCC GGGCGACGAT CCGGCCGTCA TCGCGAGCGG TCCCACGGTG
CCTGACGCCA CCACCTGCGC CGATGCGCTG GCCATCCTCG ACCGCTACGG CATCGAGGTG
CCGGCGCCGG TGCGCGCGCA GCTCGAGAGC GGCGAGCTCG AAACCCCGAA GCCGGGCGAT
GCGGTGTTCG CGGGTCATGA AGTCCACCTG ATCGCCACGC CCCAGCAATC GCTCGAAGCG
GCGGCCAAGG CGGCGCGCGC GGCCGGCGTC GAGGCGCACA TCCTCAGCGA CGAGATCGAA
GGCGAATCGC GCGAGGTCGG CAAGATGCAT GCGGCGCTCG CGCGCGCCGT GGCGCACCGC
GGCCAGCCGT TTGCGCGGCC CTGCGTGATT CTTTCGGGCG GCGAAACCAC GGTGACCATT
CGCCCGCGCC AGCCCGGCCA GGCCAAGGGC CGCGGCGGGC GGGCCGGCGA GCTGTGCATG
GGCCTGGCCG GCGCGCTCAT GGGCCAGCCG CAGGTGTGGG CGCTGGCGGC CGACACCGAC
GGCATCGACG GCGTGGAAGA CAACGCCGGC GCCTTCGTCA CGCCCGACAC GCTGGCGCGT
GCCAGCGCGG CCGGCCGGAA GTTGTCGGAC CACCTCGACC GCAACGACGC GTACGGCTAC
TTCGACGCGA TCGGCGACCT GTTCGTGACC GGCCCGACCA ACACCAACGT CAACGACTTC
CGCGCGCTGC TGATCCTGTA G
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| Protein sequence | MTASNPSFGP APDPREAPRA FLEHLYRVAV DRALPLSTLG AHLPKPPKGR TLVLGAGKAG
GSMVQALEAL WPADAPLSGL VVTRYDHVPP RPEGVPQRIE LVEAAHPVPD AAGQQAAARI
LALAQGLTAD DLVLCLISGG GSSLLVLPAE GLTLEDKQRI NKQLLDSGAG IGEMNCVRKH
LSRIKGGRLA AACAPARVVT LTISDVPGDD PAVIASGPTV PDATTCADAL AILDRYGIEV
PAPVRAQLES GELETPKPGD AVFAGHEVHL IATPQQSLEA AAKAARAAGV EAHILSDEIE
GESREVGKMH AALARAVAHR GQPFARPCVI LSGGETTVTI RPRQPGQAKG RGGRAGELCM
GLAGALMGQP QVWALAADTD GIDGVEDNAG AFVTPDTLAR ASAAGRKLSD HLDRNDAYGY
FDAIGDLFVT GPTNTNVNDF RALLIL
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