| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3894 |
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| Symbol | |
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| ID | 7970323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4126123 |
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| End bp | 4127088 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794480 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945774 |
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| Protein GI | 239816864 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0107663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAGA AGAAGCGCAT CCTGAAATCG CTGGCCGCAC TGGCTGCCTG CGTGCCGCTG
CTGGGCTGGG CCGCGTGGCC CGAGAAGCCG ATCCGCATGG TGGTGCCGTA CGCCGCGGGC
GGCGGCGCCG ACAACACCGC GCGCGTCGTC GCGCAGCAGT TGAGCATCGC GCTCGGCCAG
CAGATCGTCA TCGACAACCG GCCGGGCGCA GGCGGCGTGA TCGGCGAGGA CAACGTGGCC
AAGGCGCCCG CCGACGGCTA CACCGTGCTC TACGACGCCT CGGCGTTCTC GGTGAACCCG
TCGCTGCGCA AGCTGCCTTT CGATGCCGCG AAAGACTTCA TCCCGGTGTC GCTGGTGGCC
ACCGCGCCGC AGATCCTCGT CGTGCCTGCC ACGGCGCCGT ACCAGACGGT GGCGCAGTTC
CTCGACTTCG CGCGCAAGAA CCCCGGCAAG CTGAGCTTTG CCTCGGCGGG TGGCGGCACC
GGCTCGCACC TGGCGGGCGA GGCGCTGAAC GAGCAGGCCA GGCTCAGCCT CATGCACGTG
CCCTACAAGG GCGGCGCACC CGCGCTGACC GACGTGATGG GCGAGCAGGT GTCGGCCTAC
TTCGGCAACG TGGCGTCGGC GCTCGGCTAC GTGCAGTCGG GCAAGCTGCG CGCGCTGGCC
GTGAGTTCTG CCAAGCGCGT GCCTGGCCTG CCCGACACGC CGACGCTCGC CGAGTCGGGC
CTGCCGGGCT ACAACGTGGT CGAGTGGAAC GGCGTGTTTC TTCCCAAGGG CACGCCGCCC
GACGTCGTGC AGCGGCTCGG CAAGGCGGTG CAGGCTGCCG TCAACGAGCC GCAGGTCAAG
CAGAAGCTGC TGCAGCTTGG CCTGGAACCC GCCGGCACCA CGCCGGAGGC CTTTGCGAAG
TTCGTGCAGA ACGAGACGGG GCGCGTGGGC GCGCTGGTGA AGGCGCGCAA CATCCGGGTC
GATTGA
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| Protein sequence | MTKKKRILKS LAALAACVPL LGWAAWPEKP IRMVVPYAAG GGADNTARVV AQQLSIALGQ
QIVIDNRPGA GGVIGEDNVA KAPADGYTVL YDASAFSVNP SLRKLPFDAA KDFIPVSLVA
TAPQILVVPA TAPYQTVAQF LDFARKNPGK LSFASAGGGT GSHLAGEALN EQARLSLMHV
PYKGGAPALT DVMGEQVSAY FGNVASALGY VQSGKLRALA VSSAKRVPGL PDTPTLAESG
LPGYNVVEWN GVFLPKGTPP DVVQRLGKAV QAAVNEPQVK QKLLQLGLEP AGTTPEAFAK
FVQNETGRVG ALVKARNIRV D
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