| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3881 |
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| Symbol | |
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| ID | 7969738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4110688 |
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| End bp | 4111974 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794467 |
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| Product | guanine deaminase |
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| Protein accession | YP_002945761 |
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| Protein GI | 239816851 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | [TIGR02967] guanine deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG CCTACCGCGC CTCCCTCCTG CGATTCGACG ATGCCGGCCT GCCCGTTTTC
GATGAAGACG GCCTGCTGGT CGTCGCGCCC GACAGCGCCG GCCGCCAGCG CGTGCTCGAT
GCCGGCAGCC ATGCCGCCGT GTCGCCGCGC CACCCCGATG CCGAGCTGAC CCACCTGCCG
GGCCGCATCC TCGCGCCGGG CTTCGTGGAC ATGCACATCC ACTTTCCGCA GACCGACATC
ATCGGTTCGC CCTCGCCGGG GCTCTTGCCC TGGCTCGAGA ACTACACCTT CCCGGCGGAA
GCCAGGTTTG CCGACCCTGC GCATTCGAAC GAGGTGGCCG ACGTGTTCTT CGGCGAACTG
CTGCGCAACG GCGTCACGAC CGCGCTGGCC TTTGCGACTT CGCACGTGGC CTCGGTCGAT
GCGTTCTTCG AGGGCGCCCA GCGCCGCGGC CTGCGCATGA TCAGCGGCAA GGTGCTGCAG
GACCGGCATT CGCCCGACGG CGTGCGCGAC GAAACCGAGC AGAGCCTCAT CGACACCGAG
GCGCTGATCC GCAAGTGGCA CAACACCGGC CGGCTGGGCT ACGCCATCAC CCCGCGCTTC
GCGCCCGCGA GCACCGACGC CCAGATGCGC GGCGCGGGCG AGTTGGCCGC GAAGTACCCC
GACACCTGGA TCCAGTCGCA CGTGGCCGAG AACCGCGACG AGGTGGCGTG GGTGCGCGAG
CTCTATCCCC AGGCGCGCTC CTACCTCGAC GTGTACGCCG GCTTCGGGCT GATGCGCGAG
CGCGCCGTGT ATGCGCACTG CATCTACCTG GACGACACCG ACCGCGCGCT GCTGCGCGAC
ACCAAGACGG CCGCGGCCGT GAGCCCGACC AGCAACCTGT TTTTGGGCAG CGGCTTCTTC
GACTTTGGTG CGGCCGACCG CGTGGGCTAC CCCTACGGCC TGGCCAGCGA CGTGGGCGGC
GGCACCAGCT TCAGCCCCTT CCACACGATG CTGGCCGCCT ACTACGTGGG CCGCGAGGGC
CAGACCAAGG CCGGCCTGAG CATCGCGCCT TCCGAGCTCT GGTGGCGCCA CACCGGCGGC
GCGGCGCGCG CGCTCGGGCT GGATGGCGCG GTCGGCAACC TGCAGCCCGG CTGCGAGGCC
GACTTCCTCG TGCTCGACCC CCAGGCCACG CCGCTGCTGG CCCGCAAGGC CGCGCGCGCG
AACAGCCTCG AGGAGCTGCT GTTCGCGATG ATCGTGCTGG GCGACGACCG GCTGGTCGAG
CGCACGGTGA TCTCGCAGGC GGGATAG
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| Protein sequence | MKKAYRASLL RFDDAGLPVF DEDGLLVVAP DSAGRQRVLD AGSHAAVSPR HPDAELTHLP
GRILAPGFVD MHIHFPQTDI IGSPSPGLLP WLENYTFPAE ARFADPAHSN EVADVFFGEL
LRNGVTTALA FATSHVASVD AFFEGAQRRG LRMISGKVLQ DRHSPDGVRD ETEQSLIDTE
ALIRKWHNTG RLGYAITPRF APASTDAQMR GAGELAAKYP DTWIQSHVAE NRDEVAWVRE
LYPQARSYLD VYAGFGLMRE RAVYAHCIYL DDTDRALLRD TKTAAAVSPT SNLFLGSGFF
DFGAADRVGY PYGLASDVGG GTSFSPFHTM LAAYYVGREG QTKAGLSIAP SELWWRHTGG
AARALGLDGA VGNLQPGCEA DFLVLDPQAT PLLARKAARA NSLEELLFAM IVLGDDRLVE
RTVISQAG
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