Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3824 |
Symbol | |
ID | 7969681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4042077 |
End bp | 4043234 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644794410 |
Product | acetate kinase |
Protein accession | YP_002945704 |
Protein GI | 239816794 |
COG category | [C] Energy production and conversion |
COG ID | [COG0282] Acetate kinase |
TIGRFAM ID | [TIGR00016] acetate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.56864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCGCTGT TCGAGGCGCC GGCCGAGGGC GGTGCGCTGC CTGCCGCCCG CTGGTCGGGC CAGGCCGATG GCCTGGGCGC GGGGCTGAAG GCGCGGCTGC GCGTGCGCGA TGCCGAGGGC CGCACGCTGC ACGATGCGGC GCTGGAAGGC GACAGCCGCT CGCACCAGGG CGCGCTGGCT GCGCTGCTCG AATGGCATGC ACAACAAGGC GACGGCGGCC GCATCGCGGC GGTCGGCCAT CGCATCGTGC ATGGCGGCGT GAACTTCGTG GCGCCGGTGC GCATCGACGA TGCGGTGCTG GCCGAACTGG CTGCGCTCGA GCCGCTTGCG CCGCTGCACC AGCCGCACAA CCTCGCGGGC GTGCGCGCGG CCATGAAGGC TTTCGATGGC GTGCCGCAGG TGGCGTGCTT CGACACCGCC TTTCATGCCA GCCAGCCCGA TGTGAACCGC CGCTTCGCGC TGCCGCGCGC GCTGCACGAT GCAGGCGTGC GGCGCTACGG CTTCCACGGC CTGTCCTACG AATCGATCGT GACGCAGTTC GCGCAACTGG CGCCGCAGCT GGCACGGCAG CGCGTGATCG TCGCGCACCT GGGCAACGGC GCATCGATGT GCGGCATGGC CGAGGGCCGG TCGGTGGCCA CGACGATGAG CTTCTCGCCG CTCGACGGCC TCACCATGGG CACGCGCTGC GGGCATCTCG ATGCGGCCGT GGTGCTGTAT TTGATGCGCT CGCAGGGCAT GTCGGCGGAC GATGTCGAGA AGCTGCTGTT CCGCGAATCG GGCCTGCTGG GGCTGTCGGG AATTTCCAGC GACATGCGCG AGCTGGAGGC TTCGGCCGTG CCCGCCGCCG CCGAAGCCAT CGCGCATTTC ACCGAGCAGG TGGTGCAGCA CATGGGCAGC CTGGCTGCGG CGCTGCGCGG CGTGGATGCC ATCGTGTTCA CCGGGGGCAT CGGCGAGAAC GCCGCCGCGC TGCGCGAGCG CGTCCTTCTG CAATGCGGCT GGCTCGGCTT GCGCGTCGAC GTGGAAGCGA ACCGCGCGGG CAAGGCGCAA CTCACCACGC CCGAAAGCGC CGTCAGCGCC TGGGTGCTGC GCACCGACGA AGAGGCCGTG ATCGCGCGGC ACACCGCGCG GCTGCTGCGG CTCAGCCAGG CTGGATAG
|
Protein sequence | MALFEAPAEG GALPAARWSG QADGLGAGLK ARLRVRDAEG RTLHDAALEG DSRSHQGALA ALLEWHAQQG DGGRIAAVGH RIVHGGVNFV APVRIDDAVL AELAALEPLA PLHQPHNLAG VRAAMKAFDG VPQVACFDTA FHASQPDVNR RFALPRALHD AGVRRYGFHG LSYESIVTQF AQLAPQLARQ RVIVAHLGNG ASMCGMAEGR SVATTMSFSP LDGLTMGTRC GHLDAAVVLY LMRSQGMSAD DVEKLLFRES GLLGLSGISS DMRELEASAV PAAAEAIAHF TEQVVQHMGS LAAALRGVDA IVFTGGIGEN AAALRERVLL QCGWLGLRVD VEANRAGKAQ LTTPESAVSA WVLRTDEEAV IARHTARLLR LSQAG
|
| |