Gene Vapar_3764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3764 
Symbol 
ID7970924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp3982556 
End bp3983164 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content68% 
IMG OID644794351 
Producthypothetical protein 
Protein accessionYP_002945646 
Protein GI239816736 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGC ACGTTTTTCG CACCCTTGCG GGTCTTTCCG TGGCCGGCCT GCTGGCGACC 
GGCGCCAGCG TGGTGCAGGC CCAGCAAGTG GTCCAGGCCC GGGTGATTTC GGCCACCCCG 
ATCCGCGAGA CGACCGGCAG CGACGTGAGC TACAACGTCA CCTACGAATA CAACGGCCGC 
CAGTACACCA CCCGCACCAA CAGCCGGCCG GGCGCGACCA TCCCGGTCGA GGTCGGCGCC 
TATGGCGTGA CGACCTCGCC TGTGGCGCCG CAGCCGCAGT TGCAGCCCTA CCCCGTCGAG 
GCCAACAACA GCGGCCAGCA ACAGCAGTAT CAGCAGCAGT ACCAACAGCA GCAGCCGCAA 
TACGCGCAGC CGGGCGGCTC GCCCTGGGAC AACGTCGTGC CCGAACCGGG CGTGGTGGTC 
TCCAATGCGC CGGCGCCGGT CTACGTGCAG CCGGCACCGG TGTATGCGCC GCCCGTCTAC 
GTGCAGCCTG CCTACACCTA TCCCTACGCC TATCCCTATG CCTACCCGCC GGTGGGCATT 
TCGCTCAACC TGGGGTACTC GAGGGGCTGG GGCGGCTACC GCGGATACGG CTACCGCCAC 
TGGCGCTGA
 
Protein sequence
MNKHVFRTLA GLSVAGLLAT GASVVQAQQV VQARVISATP IRETTGSDVS YNVTYEYNGR 
QYTTRTNSRP GATIPVEVGA YGVTTSPVAP QPQLQPYPVE ANNSGQQQQY QQQYQQQQPQ 
YAQPGGSPWD NVVPEPGVVV SNAPAPVYVQ PAPVYAPPVY VQPAYTYPYA YPYAYPPVGI 
SLNLGYSRGW GGYRGYGYRH WR