| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3757 |
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| Symbol | |
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| ID | 7970917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3975177 |
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| End bp | 3976565 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794344 |
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| Product | glutamyl-tRNA synthetase |
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| Protein accession | YP_002945639 |
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| Protein GI | 239816729 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00456424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGCA AAGTTCGCAC CCGCATCGCT CCGTCTCCCA CCGGCTTCCT TCACCTGGGC
ACGGCCCGCA CCGCGCTCTA CTCGTGGGCC TATGCACGCC ATCACGGCGG CGAGTTCGTG
CTGCGCATCG AGGACACCGA CGTGGCCCGC TCCACGCAGG ACTCGACCGA CCAGATCCTG
GCTTCGATGC ACTGGCTCGG CCTGGACTAC GACGAGGGCC CCATCTACCA GATGCAGCGC
CTGGAGCGCT ACCGCGAAGT CATCGCACAG ATGCTTGAGG CCGGCACGGC CTACCACTGC
TACTGCACGC CGGCCGAGCT CGATGAAATG CGCGAGGCGC AGCGCGCGCG CGGCGAGAAG
ACGCTGTACG ACCGCCGCTG GCGCCCCGAG CCCGGCAAGA CGCTGCCGCC CGTGCCCGAA
GGCGTGCCGC CGGTGGTGCG CTTTTGCAAT CCGCCCGAAG GCGACGTGAG CTGGAACGAC
CTCGTCAAGG GCGAGATCAC CATCAACAAC CGCGAGATCG ATGACCTCAT CATCCTGCGT
CCCGACGGTG TGCCCACCTA CAACTTCGCG GTGGTGGTCG ACGACTGGGA CATGGCCATC
ACGCACGTGT TCCGCGGCGA CGAGCACATC AACAACACGC CGTGGCAGAT CAACATCTTC
CGCGCGCTTG GCGCGCCGCT GCCTGCGTTC GGCCACGTGC CGGTGATCCT GGGCGACGAC
GGGCAGAAGC TCTCGAAACG CCGCGGTGCG GTGAGCGTCA CCGCCTATGA AGAGAACGGC
TACCTGCCCG AAGCCATGCT CAACTACCTG GCGCGCCTGG GCTGGAGCCA TGGCGACGAC
GAGCTCTTCA CGCGCGAACA GATGGTGAGC TGGTTCGACG GCTCGCACCT TTCGAAGAGC
CCCGCGCAAT GGGATGCCGC GAAGCTCGCG TGGGTCAACG CGCAGTACAT CAAGGCCAAG
CCCGACGCGG AGCTTGCACC GCTCGTGGCC GCGCAGCTGA AAAAGCGCGG CATCGAGGTC
GACGATCGGC TGCCCGCCAT TTGCGCGCTC TTCAAGGACC GCTGCGAAAC CACGGTCGCG
CTGGCCGACT GGGCCGCCGC GTTCTACGCG GACGTGGCGC CGAGCGAAGC CGACCTCGCG
GCGCATGTCA CCGATGCAGT GAAGCCCGTC ATCGCAACGC TCGCCGAGAA GCTCGCGGGC
GTGGCATGGG AAAAAGTTTC GATCGCCGCG GCCATCAAGG AAGTCCTGGC CGCGCATTCG
GTGAAAATGC CTGTGTTGGC GATGCCGGTT CGCGTCCTCC TGATGGGAAC ACCGCAGACG
CCATCCCTCG ATTCGGTGCT CGCCATCTTT TCTCGTGAAA AAGTTATCGA GCGTTTGAAA
AGGGCCTGA
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| Protein sequence | MTGKVRTRIA PSPTGFLHLG TARTALYSWA YARHHGGEFV LRIEDTDVAR STQDSTDQIL
ASMHWLGLDY DEGPIYQMQR LERYREVIAQ MLEAGTAYHC YCTPAELDEM REAQRARGEK
TLYDRRWRPE PGKTLPPVPE GVPPVVRFCN PPEGDVSWND LVKGEITINN REIDDLIILR
PDGVPTYNFA VVVDDWDMAI THVFRGDEHI NNTPWQINIF RALGAPLPAF GHVPVILGDD
GQKLSKRRGA VSVTAYEENG YLPEAMLNYL ARLGWSHGDD ELFTREQMVS WFDGSHLSKS
PAQWDAAKLA WVNAQYIKAK PDAELAPLVA AQLKKRGIEV DDRLPAICAL FKDRCETTVA
LADWAAAFYA DVAPSEADLA AHVTDAVKPV IATLAEKLAG VAWEKVSIAA AIKEVLAAHS
VKMPVLAMPV RVLLMGTPQT PSLDSVLAIF SREKVIERLK RA
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