| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3745 |
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| Symbol | |
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| ID | 7970902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3956486 |
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| End bp | 3961048 |
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| Gene Length | 4563 bp |
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| Protein Length | 1520 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794329 |
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| Product | KR domain protein |
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| Protein accession | YP_002945627 |
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| Protein GI | 239816717 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCAAC CCTTCGAACC CTCCGAGCCG AGCGGCATCG AGATCGCCAT CGTCGGCATG
GCCGGGCGCT TTCCCGGCGC CGGCGACGTG GACGCCTTCT GGCGCAACAT CCGGGACGGC
GTGGCCTCGG TCTCCCGCTT CACCGACGAG CAGCTGCGCG CGCAAGGCGT GCCGCAGTCG
CTGCTGGACG ACCCCGACTA CGTGAAGGCC GGCGTGATGT TCGAGGGCTT CGACAAGTTC
GATGCCGGTT TCTTCGGCTA CTCGCCGCGC GAGGCCGAAA CCCTCGACCC GCAGCAGCGC
ATCTTCCTGG AATGCGCCTG GGCCTCGCTG GAACATGCGG GCTGCGACGC CGCACGCTGG
CCGGGCAAGG TCGGCGTGTA TGCGGGCGAG GGCGCCAACG TGTACCTCAT CCGCAACCTG
CTGCCGTCGT TCGGCCTTGG TGCGGCGAGC GGCATCGCCG ACCTGCTGGG CCTCATGAGC
GGCAACTCGG GCGGCTCGCT GTGCACCCGC GTGTCGTACA AGCTCGACCT GCGCGGTCCC
GCGGTGACGG TGCAGACCGC CTGCTCCACG TCGCTCGCCG CGGTCCACAC GGCCTGCCAG
GCGCTCCTGA GCCACGACTG CGACATGGCC CTGGCCGGCG GCGTGTGGCT CAACCTGCTG
CAGGAAGGCG GCTACCGCTA CCAGGCCGGC GCCATCCTCT CGCCCGACGG GCACTGCCGC
GCCTTCGACG CGAAGGCGGC CGGCACCGTC ATCGGCAGCG GCGCAGGCAT CGTGGTGCTC
AAGCGGCTGG ACGACGCGCT GCGCGACGGC GACACCATCC ATGCGGTCAT CAAGGGCAGC
GCGGCCAACA ACGACGGCGC CGCCAAGGTC GGCTTCACGG CGCCCAGCGT GGACGGCCAG
GCCGAGGTGA TCCGTGCGGC CCAGCTCATC GCGGGCGTGC CGGCGGACAC CATCGGCTAC
ATCGAGGCGC ACGGCACCGC GACCACGCTG GGCGATCCCA TCGAACTCGC CGCGCTCACG
CAGGCCTTTC GCGCCGAGAC CGCGCGCCGC GGCTTCTGCG CCGTGGGTTC GGTGAAGACC
AACATCGGCC ACCTGGATGC CGCGGCCGGC GTGGCCGGGC TGATCAAGAC GGTGATGGCG
CTCAAGCACC GCATGCTGCC GCCCAGCCTG CACTACGAGA ATCCGAACCC GCAGATCGAT
TTCGCGTCCA GTCCGTTCTA CGTCAATGCG CAACTGCGTG CCTGGCCCGA AGGCCGGGCG
CCGCGCCGCG CAGGCGTGAG CTCGTTCGGC ATCGGCGGCA CCAATGTGCA CGTGGTGCTC
GAAGAGGCGC CGGCCGTTGC CGCGGCAAAG CCTGCTTCCG GCTGGCAGGT GCTGCCCGTG
TCGGCAAAGG ACGAAGCCGC GCTGGCGCAG GGCCGCTTGC AACTCGCGGC GCATCTGCAG
GCCCATCCGG AGCTGGCGCT GGGCGATGTG GCCCACACGC TGCAAAGCGG ACGCCGCCCC
TTCGCCTGGC GCAGTGCCGT GGTGGCCAAC CAGCCGGCGA TGGCCTCCGA GATGCTGGCT
TCGCCCATGG CCCCGTCGAC GCGCGTGCCC GCCGCCGCGC CCGAGGTGGT GTTCCTTTTC
CCCGGCGGCG GCACGCAGCA TGCACGCATG GGCGAGGCGC TTTATCAGCG CAGCGCCGTG
TTCCGCGAGG AGCTCGACCG CTGCGCCGCA CTGCTGAAGG CCGGCTGCGG CATCGACCTG
CTCGCGCTGG TGTTCCCGGC CGACGGCGAC GAAGCCGCGG CGAACGAGCG GCTGTTCCGC
ATGGCATACG CGCAGCCCGC GCTGTTCGCC GTCGAGTACG CGATGGCGCG CTGGTGGATG
AGCTGCGGCG TGCAGCCCGC GCTGATGCTC GGCCACAGCC TCGGCGAATA CGTGGCGGCC
TGCCTGTCGG GCGTGTTCTC GCTCGAAGAC GCGCTGCGCA TCGTGGCCGC GCGCGGCCGC
CTGATGCAGA CGCTCGCGGC GGGCGCGATG ACGGCGGTGT CGCTGCCCGA ATCGGCGCTG
GCCGAATTCC TTCGCGACGG CTGCGACCTG GCCGCGGTGA ACGGCGAGCA GCTCTGCGTG
CTGGCCGGCC CGCTGGACGC CATCGAGCGC GCCGAAGAAG CGCTGCGTGC GCGCCAGCAA
CTGCCGCGCC GCCTGCATGT GGCCATCGCC TCGCATTCGA GCCTGGTCGA TCCCATCGTG
GCCGAGCTGG AGCAGCTGAT CGCCTCGCTG CCGCGCCATG CGCCGCGCAT TCCCTTCCTG
TCGAACGCGA CGGGCCGGCC GATCACCGAA GCAGAGGCAA CCAGCCCGGC GTACTGGGGC
CGCCACCTGC GCGGCACCGT GCGCTTTGCC GAGGGCCTGC GCGAGATCTT CGCCGCGCCG
GGCCGTGTGC TGCTCGAGGT CGGCCCCGGC GAAACGCTCG CGGGCCTCGC GCGCCAGCAT
CCACAAAGCC GCGAGGCCGC GGGCATCTGG GCGAGCCAGG CGCACCCGCA GCAAACGGCG
CGCAACGCCC AGCAGCTGGC CGTTGCCGTG GCGGGACTGT GGACCGCGGG CGTCGACATC
GACTGGGCGG CCTGCCGCGC GGAAGGCGCA AGCCGGCGCC GCGTGCCGCT GCCCACCTAT
GCCTTCCAGC GCAAGCGCTT CTGGATCGAG GCGGGCGAGG CCGCGCAGCC TGCGAAGAGC
ACGGCGCCGA ACCTCTTCTA CGCGCCCCTC TGGGAACGCA GCGCGCCGCT TTCGCCCGCT
GAAAAGCAGG ACGAGCGCGC AGGTTGCACG CTGGTGCTCG GCGATGCGAA CAGCTTCACC
GACCGGCTCG CGCGCACCCT GCGCGAGCGC GGCGAAAAAG TGGTGCTGGC CTTGCGCGGA
CCGCGCTTTG CCCGCACCGC GCCGGGCCAG TACGCCCTGC GCGCGGGCGA GCGCTCCGAC
CACGAAGCGC TGCTGCGCGA GGCCGAAGCC GAAGCCGGGC CGGTGCTGCG CCTGCATCAC
CTGTGGAGCC TGGACGGCGA CCGGCCCGCG GCATCGCACG CGCAGGTCTT CGAGGCCGGC
TACTTCAGCC TGCTTGCACT CGCGCACGCG CTCGATGCGG TGGGTGCTGC AGGCCGCGGG
ACTCTTGCGC TCACTGTCGT CACCGATCGC GTCGAAGACG TTGCCGGCAC CGAGCCGCTC
GCACCCGAGA AGGCCACGCT GCTCGGCCTC GCGAAGATAC TGGGCCAGGA GTACCCGTCG
ATCGCCTGCC GCGTCGTGGA CGTGGTGCTG CCCGCACCCG AGAGCGCGGC CGAGGCCGAG
CTTGCGCGCC GCGTGGCCGA CGAAGCATGG GCAGCGCCAG ACGAATTCCT GGTGGCCTAC
CGCGGGCCGC ATCGCTGGCG GAAGCGCTAT GCGCCGCTGC CCGATGTGCC CGCGCCCGCC
GCAAGGCAGC GCCTGCGCGA AGGCGGCGTC TACCTCATCA CCGGTGGCAT GGGCGGCGTC
GGCTTGGCGA TGGCGCGCTA CCTGAGCCGC ACCTGGAAAG CGAAGCTCGT GCTGCTTGGC
CGTACGCCGC TGCCCGGGCG CGGCGATTGG GAGCGCCTCG TTGCGGACGC CGGCCAGCCC
GTGGTGCTGC GGCGCAAGCT GCAGCAGCTG ATCGATCTCG AAGCGGACGG CGCCCAGGTG
CTGCCGGTGG CGGCCGACGT CAACGATGCC GCGCAACTGC GCGCGGCCCT CGCCGCCGTG
CATGCGCGCT TCGGTGCAGT CCACGGCGTG GTGCATGCCG TCGTGCACCC CGACCGCGGC
ATGATCGCCC AGCGCACGCC GGCGCTGGTC GAAGCGGCCT TCGCGCCCAA GATCGCGGGC
ACGCTCGCGC TGCTCGATGC GCTGCGCACC GAGCCGCTGG ACTTCGTGCT GTTCTGCTCG
TCGATCTCGG TGCTGATCGG CGGCCTCGGC CGCAGCGACT ACGCCGCCGC CAATGCCTAC
CTGGACGCAC TGGCCACGGC CAGCCGCCGC AGCTCGCCGT TGCCGCTGTT CTCGGTCAAC
TGGGATGCGT GGCGCGACGT CGGCGTGGCG CTCGACATGG ACCTGCCCGA GGGCGTGGGC
CTGGACGAAC GCACCGGCGT GCTCGCCTTC GAACGCATTG CCAACGGCCC CGACCTGCCG
CAGACCATCG TGTCCGTCTC GCCGCTGGCG CCGCGCCTCA AGCCGCTCGA CGACCTGTTC
GATTCACTCG ACGACGCGCC TGCGGCCGAG GTGCGCACCG GCCATTCGCG CCCCGTGCTG
CAGACGCCGT ATGCCGCCCC TGAAGGCGAG CTGGAAGAAG CGCTTGCCGG CTTCTGGAGC
GATGCGCTGG GCATCGTGCC CGTGGGCGTG CACGACAACC TGTTCGAGCT GGGCGGCGAT
TCGCTGCTCG CCATCCGCCT GCTGGCCCGC GTGCGCAAGG CCTACGGGGT GGAACTGCAT
CCCGCCGCAT TCTTCAAGGC GCCGACCATC GCCGAGCTGG CGACCCTGGT TGAGCTGCGT
CTGATCGAGG ACATCGAACG CGAAGCCGAA ACCGCAGAAA CCACCGAAGA CAGCGCACCA
TGA
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| Protein sequence | MSQPFEPSEP SGIEIAIVGM AGRFPGAGDV DAFWRNIRDG VASVSRFTDE QLRAQGVPQS
LLDDPDYVKA GVMFEGFDKF DAGFFGYSPR EAETLDPQQR IFLECAWASL EHAGCDAARW
PGKVGVYAGE GANVYLIRNL LPSFGLGAAS GIADLLGLMS GNSGGSLCTR VSYKLDLRGP
AVTVQTACST SLAAVHTACQ ALLSHDCDMA LAGGVWLNLL QEGGYRYQAG AILSPDGHCR
AFDAKAAGTV IGSGAGIVVL KRLDDALRDG DTIHAVIKGS AANNDGAAKV GFTAPSVDGQ
AEVIRAAQLI AGVPADTIGY IEAHGTATTL GDPIELAALT QAFRAETARR GFCAVGSVKT
NIGHLDAAAG VAGLIKTVMA LKHRMLPPSL HYENPNPQID FASSPFYVNA QLRAWPEGRA
PRRAGVSSFG IGGTNVHVVL EEAPAVAAAK PASGWQVLPV SAKDEAALAQ GRLQLAAHLQ
AHPELALGDV AHTLQSGRRP FAWRSAVVAN QPAMASEMLA SPMAPSTRVP AAAPEVVFLF
PGGGTQHARM GEALYQRSAV FREELDRCAA LLKAGCGIDL LALVFPADGD EAAANERLFR
MAYAQPALFA VEYAMARWWM SCGVQPALML GHSLGEYVAA CLSGVFSLED ALRIVAARGR
LMQTLAAGAM TAVSLPESAL AEFLRDGCDL AAVNGEQLCV LAGPLDAIER AEEALRARQQ
LPRRLHVAIA SHSSLVDPIV AELEQLIASL PRHAPRIPFL SNATGRPITE AEATSPAYWG
RHLRGTVRFA EGLREIFAAP GRVLLEVGPG ETLAGLARQH PQSREAAGIW ASQAHPQQTA
RNAQQLAVAV AGLWTAGVDI DWAACRAEGA SRRRVPLPTY AFQRKRFWIE AGEAAQPAKS
TAPNLFYAPL WERSAPLSPA EKQDERAGCT LVLGDANSFT DRLARTLRER GEKVVLALRG
PRFARTAPGQ YALRAGERSD HEALLREAEA EAGPVLRLHH LWSLDGDRPA ASHAQVFEAG
YFSLLALAHA LDAVGAAGRG TLALTVVTDR VEDVAGTEPL APEKATLLGL AKILGQEYPS
IACRVVDVVL PAPESAAEAE LARRVADEAW AAPDEFLVAY RGPHRWRKRY APLPDVPAPA
ARQRLREGGV YLITGGMGGV GLAMARYLSR TWKAKLVLLG RTPLPGRGDW ERLVADAGQP
VVLRRKLQQL IDLEADGAQV LPVAADVNDA AQLRAALAAV HARFGAVHGV VHAVVHPDRG
MIAQRTPALV EAAFAPKIAG TLALLDALRT EPLDFVLFCS SISVLIGGLG RSDYAAANAY
LDALATASRR SSPLPLFSVN WDAWRDVGVA LDMDLPEGVG LDERTGVLAF ERIANGPDLP
QTIVSVSPLA PRLKPLDDLF DSLDDAPAAE VRTGHSRPVL QTPYAAPEGE LEEALAGFWS
DALGIVPVGV HDNLFELGGD SLLAIRLLAR VRKAYGVELH PAAFFKAPTI AELATLVELR
LIEDIEREAE TAETTEDSAP
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