Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3660 |
Symbol | |
ID | 7973893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3860249 |
End bp | 3861505 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644794245 |
Product | protein of unknown function DUF323 |
Protein accession | YP_002945543 |
Protein GI | 239816633 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03440] conserved hypothetical protein TIGR03440 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTTT CCCGGCCGAT CACCCAGGCG GCGAGCGCGC TGCGCGGCAA GTTCCGCGAA GTGCGCGCCG CCAGCCTGGC ACTCGCCGCG CCGCTCTCCG CCGAAGACCA GTGCATCCAG TCGATGCCCG ACGCGAGCCC GACCAAATGG CATCTCGCGC ACACGACCTG GTTCTTCGAG ACCGTGCTGC TCCAGCCGCA TGCGGCGGGC TACCGGCCTT TCGACGAGCG GTTCCATTAC CTCTTCAACT CGTACTACGA AGCGCTCGGC CCGCGCCATC CGCGCCCGCA GCGGGGGCTG CTCACGCGCC CTTCCGTGGA CGAGGTGCAT GCCTACCGCG CCCATGTCGA CGAGGCAGTG CTGGCGCTGC TCGACGACGC CGACGGCGAG CGCGATTGGG CGGCCATCGA GCCCATCGTC ACGCTCGGAC TGCACCACGA GCAGCAGCAC CAGGAGCTGC TGCTCACCGA CATCCTGCAT GCCTTGTCAT GCAACCCGCT GTTGCCCGCC TACCGGCCCG CGGCCGGGCC CGCGCTGCGG CTGGCTGCCG TGCCGCCGGC CATGCGCTGG CTGCCGCAGC CCGGCGGCAT GGTGCAGGTG GGCCACGAGG GGCCGCAGCA GGGCTTTGCC TTCGACAACG AAACGCCGCG CCATGCGGCC CTGCTGCAGC CCTATGCCAT GGCCGACCGG CTGGTGAGCT GCGGCGACTA TGCGCAGTTC ATTGCCGACG GCGGCTACCA GCGCCCCGAG CTCTGGCTCT CCGACGGCTG GGCGGCGGTG CAGGCGCAGG GCTGGCGCCA TCCCGCCTAC TGGCTGGCCG CCGACGACCC GCGGCTGCAG GCCCAGCAGC CGCAGGGCGG CTGGCAGGTG TTCGGCCTGC ATGGCGTGCG GCCGATGGAG GCCGATGCAC CCGTGTCGCA GCTGAGCTTC TACGAGGCCG CCGCGTATGC CGAATGGGCC GGTGCGCGCC TGCCGACCGA ATTCGAATGG GAAGCGGCCT TCGATGCGCC CGGCATCTCG CAGATGACCG GCCACGTCTG GCAATGGACG CGCTCCTCCT ACGACCCGTA TCCCGGCTTC AGGCCCATGC CCGGCATCGC GGCCGAATAC AACGGCAAGT TCATGGTGGG CCAACTGGTG CTGCGTGGCG GCAGCGTGGC GACGCCGGCC GGGCACACGC GGCCCAGCTA CCGCAATTTC TTTCCGCCGG CGGCGCGCTG GCAGTTCTCG GGGCTGCGGC TCGCGAAAGA CATCTGA
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Protein sequence | MTLSRPITQA ASALRGKFRE VRAASLALAA PLSAEDQCIQ SMPDASPTKW HLAHTTWFFE TVLLQPHAAG YRPFDERFHY LFNSYYEALG PRHPRPQRGL LTRPSVDEVH AYRAHVDEAV LALLDDADGE RDWAAIEPIV TLGLHHEQQH QELLLTDILH ALSCNPLLPA YRPAAGPALR LAAVPPAMRW LPQPGGMVQV GHEGPQQGFA FDNETPRHAA LLQPYAMADR LVSCGDYAQF IADGGYQRPE LWLSDGWAAV QAQGWRHPAY WLAADDPRLQ AQQPQGGWQV FGLHGVRPME ADAPVSQLSF YEAAAYAEWA GARLPTEFEW EAAFDAPGIS QMTGHVWQWT RSSYDPYPGF RPMPGIAAEY NGKFMVGQLV LRGGSVATPA GHTRPSYRNF FPPAARWQFS GLRLAKDI
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