Gene Vapar_3641 details

Gene Information

• Locus tag: Vapar_3641
• ID: 7970716
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 3846669
• End bp: 3847334
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 644794226
• Product: Glutathione S-transferase domain protein
• Protein accession: YP_002945524
• Protein GI: 239816614
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0625] Glutathione S-transferase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGACC CTCGCCTGCC CATCCTCTAC AGCTTTTGCC GCTGCCCCTA CGCGATGCGT 
GCCCGGCTCG CCCTGGCCGC CAGCGGCGAG CGCTGCGAGT TGCGCGAAGT GGTGCTGAAG 
AACAAGCCGC CCGACATGCT CGCCGCCTCG CCCAAGGGCA CGGTGCCGGT GCTGGTGCTG 
CCCGATGCCG CCGTGCTGGA GCAAAGCCTG GACATCATGC GGTGGGCGCT GGGCCGCAAC 
GATCCGCTGC GCTGGCTCGC ACCCGAGGCG GGCACGCTCG ACGGCATGCT CGCGCTCGTG 
GCCGCGTGCG ACAACCACTT TAAGCCGCAG CTCGACCGCT ACAAGTACCC GGGCCGCTTC 
GCGGACGCGC CCGCCGGCAC TGCGCGCGAA CTGGGTGCGC AGTTCCTGCT GGAGCTGGAA 
GCCCGGCTCG CCAGCGGCTC CGGGCCGCAG CTCTTCGGCG CGCGCGCGGC GCTGGCCGAT 
GCCGCCGTCA TGCCCTTCGT GCGGCAGTTC GCGATGGTCG AGCCCGCATG GTTCGAGAGC 
CAGCCCTGGC CGCTGCTGCG CGCCTGGCTC GCGGGCTGGA CGACCTCGCC GCTGTTCGAG 
CGCGCGATGC ACAAGTACGC GCCCTGGGCC CCGGGTGAAG CGGGCGCCGC CTACCCGCCG 
GCCTGA 

 

Protein sequence

MQDPRLPILY SFCRCPYAMR ARLALAASGE RCELREVVLK NKPPDMLAAS PKGTVPVLVL 
PDAAVLEQSL DIMRWALGRN DPLRWLAPEA GTLDGMLALV AACDNHFKPQ LDRYKYPGRF 
ADAPAGTARE LGAQFLLELE ARLASGSGPQ LFGARAALAD AAVMPFVRQF AMVEPAWFES 
QPWPLLRAWL AGWTTSPLFE RAMHKYAPWA PGEAGAAYPP A