| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3629 |
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| Symbol | |
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| ID | 7970704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3838045 |
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| End bp | 3839007 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794214 |
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| Product | GTP-binding protein HSR1-related |
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| Protein accession | YP_002945512 |
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| Protein GI | 239816602 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1161] Predicted GTPases |
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| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATCC AGTGGTTCCC CGGGCACATG TACACGACCC AGAAGGCCAT CACCGAGCGG
GTGAAGGACA TCGACGTGGT CATCGAGCTG CTCGACGCAC GCCTGCCCGG CTCCAGCGCC
AACCCGATGC TGGCCGAACT CACCTCCGGC CGGCCCACGC TCAAGGTGCT CAACAAGCAG
GACCTGGCCG ACCCGGCGCG CACGGCGCTC TGGCTTGCGC ACTACAACGC GCTGCCCGCC
ACGCGCGCCA TTGCGCTCGA CGCGAGCCTG ACCACGCCCG CGCAGGCCAT CGTGCGCGCC
TGCCACGAGC TTGCGCCCAA CCGCGGCGGC ATGGCCAAGC CGATGCGCGT GCTGATCTGC
GGCATTCCGA ACGTCGGCAA GTCGACGCTC ATCAATACGC TCACCGGCAG CCGCAAGGCC
AAGACCGGCG ACGAGGCCGG CATCACCAAG CTGGAGCAGC GCATCACGCT GGCCGACGAC
TTCTACCTGT GGGACACGCC CGGCATGCTG TGGCCGCGCA TCGTGGTGCC CAAGAGCGGC
TACAACCTGG CGGCCAGCGG CGCCGTCGGG CGCAACGCCT TCGACGAGGA AGAAGTGGCG
CTGGAGCTGC TCAACTACCT CAAGACGCAC TACGCGGCCG GCATCACCGA GCGCTTCAAG
CTGGCCGAGC TCGATGCCGC GGCCATTGCC GCCATGAAGG ACGAGGAAGT GCTCGACGCC
ATCGGCCGCA AGCGCGGCGC GCTGCTGGGC AAGGGCCGCG TCAACCTGCA GAAGGCGGCC
GAGATCGTGA TGCACGAGTT CCGCGCGGGC AACCTCGGGC GCGTCACGCT CGAGACGCCC
GAGGAGTTTG CGCAGTGGCT CGCCGAGGGG CTGCGCGCCG ATGCGGAGCG TGCGGCAAAG
AAGGCGGCGC GCGGAAAGAA GGGCAAACCC AAGCCTGAGG CCGCGCCCGA ACAGGACGCA
TGA
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| Protein sequence | MAIQWFPGHM YTTQKAITER VKDIDVVIEL LDARLPGSSA NPMLAELTSG RPTLKVLNKQ
DLADPARTAL WLAHYNALPA TRAIALDASL TTPAQAIVRA CHELAPNRGG MAKPMRVLIC
GIPNVGKSTL INTLTGSRKA KTGDEAGITK LEQRITLADD FYLWDTPGML WPRIVVPKSG
YNLAASGAVG RNAFDEEEVA LELLNYLKTH YAAGITERFK LAELDAAAIA AMKDEEVLDA
IGRKRGALLG KGRVNLQKAA EIVMHEFRAG NLGRVTLETP EEFAQWLAEG LRADAERAAK
KAARGKKGKP KPEAAPEQDA
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