Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3596 |
Symbol | |
ID | 7970671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3801269 |
End bp | 3803617 |
Gene Length | 2349 bp |
Protein Length | 782 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644794181 |
Product | ferredoxin |
Protein accession | YP_002945479 |
Protein GI | 239816569 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2124] Cytochrome P450 |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGATA CCGCCATGCC TTCGCGCACT TCCGGCTGCC CCGTCGCGCA CGGGCCGCTG TCTTCCGAGC GCACGCCCAC CGGCTGCCCT GTGAGCGCGC GCGCCGCCGA GTTCGACCCC TTCGAGGACG GCTACCAGCA GGACCCGCCC GAGTACGTAC GCTGGGCGCG CGAGAAGGAG CCGATCTTCT TCAGCCCCAA GCTCGGCTAC TGGGTGATCA CGCGCTACGA CGACATCAAG GCGGTGTTCC GCGACAACAT CACCTTCAGC CCCTCCAACG CGCTCGAGAA GATCACGCCC ACCGGCGACG AGGCCAACGC CGTGCTCGCC TCCTACGGCT TCGCGCTGAA CCGCACGCTG GTCAACGAGG ACGAGCCCGC CCACATGCCG CGCCGCCGCG TGCTGATGGA CCCGTTCACG CCCGAGGCGC TCAAGCACCG CGAGCCGATG GTGCGCGAGC TGGCGCGCAG CTATGTCGAC CGCTTCATCG ACGACGGCCG TGCCGACCTC GTCGACCAGA TGCTGTGGGA AATTCCGCTG ACCGTGGCGC TGCACTTCCT TGGCGTGCCC GAGGAAGACA TGGACACGCT GCGCAAGTAT TCGATCGCGC ACACCGTCAA TACCTGGGGC CGCCCCAAGC CCGAGGAGCA GGTGGCCGTG GCGCATGCGG TCGGCAACTT CTGGCAGTAC GCTGGCAAGG TGCTCGAGAA GATGCGCCAG GACCCCGACG CGCCCGGCTG GATGCAGTAC GGCATCCGCA AGCAGAAGCT GCACCCCGAG GTGGTGACCG ACTCGTACCT GCACTCGATG ATGATGGCCG GCATCGTGGC CGCGCACGAG ACCACCGCCA ATGCCAGCGC CAATGCAGTC AAGCTGCTGC TGCAGCATCC GCAGGTGTGG CAGGAGCTGT GCGAAGACCC GGGCCTCATT CCCAACGCGG TGGAAGAGTG CCTGCGCCAC AACGGCTCGG TGGCCGCGTG GCGGCGCCTC GTCACGCGGG ACACGCAGGT GGGGGGCGTC GACCTGCCGG CCGGCTCGCG GCTCCTGATC GTCACCTCGT CGGCCAACCA TGACGAAGCG TATTTTTCCG ATGCCGACCT GTTCGACATC CGCCGCGACA ACGCCAGCGA CCACCTGACC TTCGGCTACG GCTCGCACCA GTGCATGGGC AAGAACCTCG CGCGCATGGA GATGCAGATC TTCCTGGAGG AATTCACGCG GCGGCTGCCG CACATGCGGC TCTCGGAGCA GCGCTTCAGC TACGTGCCGA ACACCTCGTT CCGCGGGCCC GAACACCTGT GGGTCGAGTG GGACCCGGCG GCCAATCCGG AGCGCAGGAA CCCCGCGCTG CGCGCGGTGC AGGTGCCGGT GCGCATCGGC GAGCCCTCGC GGCACGCGAT CACGCGGCCG GTGGTGGTGG AGCGCGTGAC GCCGGTGGCC GAGGGCATCG TCAAGCTGCG GCTCGCGTCG CCCGATGGCA AGCCGCTGCC GCGCTGGACC GCCGGTTCGC ACATCGACGT GGAATGCGGC TCGCCCGAGC GGTCGCGCCA GTATTCGCTG TGCGGCGACC CGGGCGAAGC CGGCGTGTTC GAGATCGCGG TGCTGCATGA GCCCGAAGGC CGCGGCGGCT CGGCCTGGGT GCATGCGCAG GTGAAGGCCG GCGACCGGCT GCGCATTCGC GGGCCGCGCA ATCACTTCCG GCTCGACGAG TCGCTGGCGA AGGCGATCTT CATCGCGGGC GGCATCGGCA TCACGCCCGT CAGCGCGATG GCGCGCCGCG CGAAGGCGCT CGGCATGGAC TACGAGCTGC ACTACAGCGG CCGCAGCCGC GCGCGCATGG CCTTCCTGGA CGAGCTCGCG GCGCTGCACG GCGAGCGGCT GCAGGTCCAT GCGAGCGACG AAGGGCGGCG CTGCGACCTG CGCGCGCTGC TTGCCGAGCC GGTGGCCGGT GCGCAGGTCT ATGCCTGCGG ACCGCTGCGC ATGCTCGAGG CGCTCGAAGA CTGCTGCGCC GCCTGGCCCG AGGGTGCCTT GCGCGTCGAG CATTTCGAGT CGACGCTCGC CACCCTCGAT CCGTCGAAGG AGCATGCCTT CGAGGTCGAG CTGAAGGATT CCGGCCTGGT GGTCAACGTG CCGCCCGGCC AGACCCTGCT GTCGGCGCTG CGCGCCGCCA ACGTCGACGT GCAGAGCGAT TGCGAGGAGG GCCTGTGCGG CTCCTGCGAA GTGCGGGTGC TGTCCGGCAA GGTCGATCAC CGCGACGTGG TGCTGACCCG CCCGGAACGC GAGGCCCACA ACAAGATGAT GGCCTGCTGC TCGCGCGCCT GCGAAGGCCG GCTGGTGCTC GAGCTCTAG
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Protein sequence | MSDTAMPSRT SGCPVAHGPL SSERTPTGCP VSARAAEFDP FEDGYQQDPP EYVRWAREKE PIFFSPKLGY WVITRYDDIK AVFRDNITFS PSNALEKITP TGDEANAVLA SYGFALNRTL VNEDEPAHMP RRRVLMDPFT PEALKHREPM VRELARSYVD RFIDDGRADL VDQMLWEIPL TVALHFLGVP EEDMDTLRKY SIAHTVNTWG RPKPEEQVAV AHAVGNFWQY AGKVLEKMRQ DPDAPGWMQY GIRKQKLHPE VVTDSYLHSM MMAGIVAAHE TTANASANAV KLLLQHPQVW QELCEDPGLI PNAVEECLRH NGSVAAWRRL VTRDTQVGGV DLPAGSRLLI VTSSANHDEA YFSDADLFDI RRDNASDHLT FGYGSHQCMG KNLARMEMQI FLEEFTRRLP HMRLSEQRFS YVPNTSFRGP EHLWVEWDPA ANPERRNPAL RAVQVPVRIG EPSRHAITRP VVVERVTPVA EGIVKLRLAS PDGKPLPRWT AGSHIDVECG SPERSRQYSL CGDPGEAGVF EIAVLHEPEG RGGSAWVHAQ VKAGDRLRIR GPRNHFRLDE SLAKAIFIAG GIGITPVSAM ARRAKALGMD YELHYSGRSR ARMAFLDELA ALHGERLQVH ASDEGRRCDL RALLAEPVAG AQVYACGPLR MLEALEDCCA AWPEGALRVE HFESTLATLD PSKEHAFEVE LKDSGLVVNV PPGQTLLSAL RAANVDVQSD CEEGLCGSCE VRVLSGKVDH RDVVLTRPER EAHNKMMACC SRACEGRLVL EL
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