| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3581 |
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| Symbol | |
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| ID | 7970656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3782427 |
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| End bp | 3784700 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794166 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945464 |
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| Protein GI | 239816554 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.09299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGCAG CCTCGCTGCT GGCCGCGTGC GGAGGCGGCA GCCACGGCGC CGGACCGGCA
GCCTTCCTGC CGCCGCCCGC GAACCAGGCC AGCAGCACCA CCTTCAGCGG CGTCCTCACG
GCCAGCGCCT TCAAGCCCGG CAGCAGCACC GACCCGGTGG TCACGCCGGG CTACTACGCC
GGCGCCACCG TCTGCGTGGA CAGCAACGGC AACGGCCGCT GCGACAGCGG CGAGCCGGCC
GCGGTCACCG ATGCCAACGG CAAGTTCAGC CTGTCGCTGT CCGGCGCGTC GGCACTCATT
GCCGACATCG GCACCAACGC CAGGAACACC GCGAGCAACA CCAACGTGGC CACGCGCGAA
GTGCTGCGCG TCATGCTCGA CCAAGTGCAG GAACAGGGCA CGGCCGTGGT GGTCAGCCCG
CTGTCCTCCG AAGTGGCGCG GCTGGTCGAG GCCAACGGCA CGAGCTATGC CGCCGAGAAG
CAGAACCTGG CCGCGCGCCT GGGCGTGCCT GTCGGTTCCC TGCTCGGCGA CGTCAACGCC
GCCAGCGGCG CCGTGCAGGC CGCCTTGCTC AATGAAGCCA ATGCGCTGAA CAACCGCTTC
GCCTACGCCA CCACCAAGCT CGACCGCGGC GACAAGTTCC CCGACGCGCT GGCCAACCCC
GGCGGCGATC CGCGCCTCGC AGGCATGGCC GGCGTGACCG CGGCCACGGC GAGCGTCGCG
GACAACCGCA AGCCCATCAC CTTCCTGCAA TCGCAGCAGG CGGCGTTCAA TGTGGAGGGC
ATTCCGCGCT ACGACAACAT CTTCATCGTG ATGCTCGAGA ACAAGGCCAC GATGTCGATC
CTGAACTCGG CCTATGCGCC CAAGATCAAC GGCTACCTGA AGGCCGGCAA CCAGCTGGTG
AGCTACTACG CCACCGGCAA CCCGAGCGAG CCCAACTACA CGGCCCTGGG CGGCGCCGAC
GACTGGGGCA TCACGGACGA CAGCCAGTGG AACTGCGACG CCACCGGCGC CAACGCCGTG
CAGGACCTGC CCGTGCCCGA CAACACCCAG CCGGGCCTGG CCAAGTCGCC CTTTGCAGCC
ACCTGCACGC AGGCCGCCGC GGTGAACCAC AACATCGTCG GCAGGCCGAA CCTGTTCAAT
GCGATCACCA ATGCCGGCCT GACCTGGCGC ACCTACAGCG AATCGATGAA CCCGGGCCAG
GACTTCCGCA CCGACAGCGT GGCCGATGCC GCCGTCACCG CCAAGGACAA CGTCTACGCG
CCGGGCACGC TGGGCGGCAA CACCACGGCC ATTGGCGACG CCACGCTCAC GCTGCCGCTG
CCGGGCGGCC TGTACAAGAC CAAGCACCAC CCCGGCATGG CCTACCAGAA CGTGCGCAGC
GCGCCCGAAT GGAAGTACAG CAACCGCACC ATGGGCGGCG GCCAGTGGGA CGCGGCGCTG
AAGAACAGCA CCGACTACGC CATTCCCGCC AGCTACGACT ACGACCAGCT CGGCACCGAC
CTGGCCAGCG GCAACGTCGG CAACCTGAAC TTCCTGGTGC CGGACCAGTG CGACGACATG
CACGGCATCA GCGTGAAGGG CGCAGGCGGC GTCGGCACCG CGAGCGACTG CGCCAGCGTG
GCCAACAACG TGTCGACCAG CGCCGTCTCG CCGATCATCA CGCGCGGCGA CAACTACGTC
GACTACACGG TCAAGCGCAT CCAGGCTTCG CCGCTGTGGC AGAACCCGCA AAAGCGCGTG
GCCATCGTGC TGATGTTCGA CGAGGGCAGC GCCACCAGCG GCTTCAACTC CTGCTGCGGC
TGGAACGTGT CGAACAGCAC GGTCGCCAAT CCGGTCAAGC AGAACGCGGA CGGCAGCTGG
TCGGTGGACG CGAGCATCAA CAACTACACC AAGGGCAACC GCGGCCACGG CGAGAGCATC
TTCGGCATCC TGACCAACCA GGCTGGCGCG CCCAAGGGCG TGTCCGACAG CGATGCCTAC
AGCCACTTCT CGTTCGTGCG CACGCTGCAG GACATGTTCC AGCTGGCCGA CCCGGCGGTC
GACGGCACGT ACATGAACCG CTCGAAGTAC ACCGAGGCTT TCATCGCCCA GAACATCGTG
AACCTGCCCG AATACGCAGG CAGCGCGGAC ACGCACTTCG ACAGCGTGCG GCCGATCAAC
CATGCCTTCG TGATTCCGGC GGGCTACACG CAGAAGCAGT CGGGCGACGT GTCGACCACG
GCGCAGGTCG GGCCGGACGC CAACCAGCTC AATGTCTGGT CGCTGAAGCA ATGA
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| Protein sequence | MLAASLLAAC GGGSHGAGPA AFLPPPANQA SSTTFSGVLT ASAFKPGSST DPVVTPGYYA
GATVCVDSNG NGRCDSGEPA AVTDANGKFS LSLSGASALI ADIGTNARNT ASNTNVATRE
VLRVMLDQVQ EQGTAVVVSP LSSEVARLVE ANGTSYAAEK QNLAARLGVP VGSLLGDVNA
ASGAVQAALL NEANALNNRF AYATTKLDRG DKFPDALANP GGDPRLAGMA GVTAATASVA
DNRKPITFLQ SQQAAFNVEG IPRYDNIFIV MLENKATMSI LNSAYAPKIN GYLKAGNQLV
SYYATGNPSE PNYTALGGAD DWGITDDSQW NCDATGANAV QDLPVPDNTQ PGLAKSPFAA
TCTQAAAVNH NIVGRPNLFN AITNAGLTWR TYSESMNPGQ DFRTDSVADA AVTAKDNVYA
PGTLGGNTTA IGDATLTLPL PGGLYKTKHH PGMAYQNVRS APEWKYSNRT MGGGQWDAAL
KNSTDYAIPA SYDYDQLGTD LASGNVGNLN FLVPDQCDDM HGISVKGAGG VGTASDCASV
ANNVSTSAVS PIITRGDNYV DYTVKRIQAS PLWQNPQKRV AIVLMFDEGS ATSGFNSCCG
WNVSNSTVAN PVKQNADGSW SVDASINNYT KGNRGHGESI FGILTNQAGA PKGVSDSDAY
SHFSFVRTLQ DMFQLADPAV DGTYMNRSKY TEAFIAQNIV NLPEYAGSAD THFDSVRPIN
HAFVIPAGYT QKQSGDVSTT AQVGPDANQL NVWSLKQ
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