| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3513 |
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| Symbol | |
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| ID | 7972139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3702689 |
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| End bp | 3703687 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794098 |
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| Product | NAD(P)H quinone oxidoreductase, PIG3 family |
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| Protein accession | YP_002945396 |
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| Protein GI | 239816486 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCCA TTGAAATCAC TTCGTACGGC GCCCCCGAGG TGCTGCGCGC CGTGGAGCGC
CCCGATCCGG TGGCCGGCGT GGGCGAACTG CTGATCCGCG TCGCGGCCAG CGGCGTGAAC
CGTCCGGACG TGCTGCAGCG CAAGGGGCAC TACCCGGTTC CGCCGGGCGC CTCCGACCTG
CCGGGCCTCG AAGTGGCCGG CGAGATCGTG TCGGGCGACG CCGCGGCCCT GGCCGAGGCG
GGGTTCAAGG TCGGCGACCG CGTCTGCGCG CTGATCGCGG GCGGAGGCTA TGCCCAGCTG
TGCGTGGCGC CCGTGGCGCA ATGCCTGCCG GTGCCCAAGG GCTGGAGCGA CATCGAGGCC
GCCTCGCTGC CCGAGACCTT CTTCACCGTC TGGAGCAACG TGTTCGAGCG CGGCCGCCTG
CAAAAGGGCG AGACCCTGCT GATCCAGGGC GGAACCAGCG GCATCGGCGT GACGGCCATC
CAGATCGCCA AGGCGCTGGG TGCCACCGTG ATCGCCACGG CCGGCAGCGA CGACAAGTGC
GAGGCCTGCA AAAAGCTGGG CGCCGACCAC GCCATCAACT ACCGCACGAG CGACTTCGCC
GAAGAAGCGA AGAAGCTCAC CGGCGGCAAG GGCGTGGACG TGGTCCTGGA CATGGTCGCG
GGCGACTACG TGGCACGCGA GATCGAATGC ATGGCCGAAG ACGGCCGGCT CGTGATCATC
GCGGTGCAGG GCGGCGTCAA GAGCGACTTC AATGCGGGCC TGGTGCTGCG CAAGCGGCTG
GTGATTACCG GCTCCACACT GCGTCCGCGG CCGGTGGCCT TCAAGGGGGC CATTGCCAAG
GCGCTGCGCG AGAAGGTCTG GCCGCTGCTC GAAAGCGGCG CGGTCAAGCC GGTGATCCAC
AGCACCTTTG CGGCCGATGG CGAACCCAGC GGGGCAGCGC AGGCGCATGC GCTGATGGAA
TCCAACCAGC ACATCGGCAA GATCGTGCTG ACATGGTGA
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| Protein sequence | MKAIEITSYG APEVLRAVER PDPVAGVGEL LIRVAASGVN RPDVLQRKGH YPVPPGASDL
PGLEVAGEIV SGDAAALAEA GFKVGDRVCA LIAGGGYAQL CVAPVAQCLP VPKGWSDIEA
ASLPETFFTV WSNVFERGRL QKGETLLIQG GTSGIGVTAI QIAKALGATV IATAGSDDKC
EACKKLGADH AINYRTSDFA EEAKKLTGGK GVDVVLDMVA GDYVAREIEC MAEDGRLVII
AVQGGVKSDF NAGLVLRKRL VITGSTLRPR PVAFKGAIAK ALREKVWPLL ESGAVKPVIH
STFAADGEPS GAAQAHALME SNQHIGKIVL TW
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