| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3503 |
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| Symbol | |
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| ID | 7972128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3693298 |
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| End bp | 3694374 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644794087 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_002945386 |
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| Protein GI | 239816476 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGACG CAGTGCATGC TTTCGGCCAG GGACTGGTCC ACGCGGGCTG GTGGACGGGC
CTGGCCTGGC CCGTGATCTG GACGCTGATC AAGATCATCG TGGTCGTGCT TCCGCTGATG
GGGGCCGTGG CCTACCTCAC GCTCTGGGAA CGCAAGGCGA TCGGCTTCAC GCAGATCCGC
ATCGGACCGA ACCGCATCGG ACCGCTGGGC CTGCTGCAGC CCATCGCCGA CGCGCTCAAG
CTGATGACCA AGGAAATCAT TCTTCCGACG GTCGCCAACA AGGGCCTGTT CCTGCTCGGC
CCGATCATGA CCATCATGCC GGCGCTCGTC GCTTGGGCCG TGATTCCCTT CGGCCCCGAC
GTGGCGCTGG CCAACATCAA CGCCGGCCTG CTGTTCGTGA TGGCCATCAC CTCGCTCGAG
GTCTACGGCG TGATCATCGC GGGCTGGGCT TCGAACTCGA AGTACGCCTT CCTGGGCGCG
CTGCGCGCCT CGGCACAGAT GGTGAGCTAC GAGATCGCGA TGGGCTTCTG CTTCGTCGTG
GTGCTGATGG TCTCGGCCAG CCTGAACATG ACCGACATCG TGACGGGGCA GGGCAAGGGT
ACCTTCGCCG ACATGGGCAT CGGCTTCCTG TCGTGGAACT GGCTGTCGCT GCTGCCGATC
TTCGTCGTCT ACTTCATCTC GGGCCTGGCG GAAACCAACC GCCACCCCTT CGACGTGGTC
GAAGGCGAGT CCGAGATCGT TGCGGGCCAC ATGATCGAGT ACTCGGGCAT GAGCTTCGCG
ATGTTCTTCC TGGCCGAGTA CGCCAACATG TGGCTGGTCT CGATCCTGTG CACCGTGCTG
TTCCTCGGCG GATGGCTGCC GCCGTTCGAG TTCCTGAGCT TCATCCCGGG CTGGATCTGG
CTCGGTGCCA AGACCTTCTG CGTGGTCACC ATGTTCCTGT GGGTCCGATC CACCTTCCCG
CGCTTTCGCT ATGACCAGAT CATGCGGCTC GGCTGGAAGA TCTTCATTCC GGTCACGCTC
GTGTGGCTGG TCGTGGTCGG TGCCTGGATG CAGACCCCGT TCAACATCTG GAAATAA
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| Protein sequence | MIDAVHAFGQ GLVHAGWWTG LAWPVIWTLI KIIVVVLPLM GAVAYLTLWE RKAIGFTQIR
IGPNRIGPLG LLQPIADALK LMTKEIILPT VANKGLFLLG PIMTIMPALV AWAVIPFGPD
VALANINAGL LFVMAITSLE VYGVIIAGWA SNSKYAFLGA LRASAQMVSY EIAMGFCFVV
VLMVSASLNM TDIVTGQGKG TFADMGIGFL SWNWLSLLPI FVVYFISGLA ETNRHPFDVV
EGESEIVAGH MIEYSGMSFA MFFLAEYANM WLVSILCTVL FLGGWLPPFE FLSFIPGWIW
LGAKTFCVVT MFLWVRSTFP RFRYDQIMRL GWKIFIPVTL VWLVVVGAWM QTPFNIWK
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