| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3498 |
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| Symbol | |
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| ID | 7972123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3688196 |
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| End bp | 3689671 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644794082 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
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| Protein accession | YP_002945381 |
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| Protein GI | 239816471 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.82433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTGT TGAGCCTTGC CATCTGGGTG CCGATCGCAT TCGGTGTCGC GTTGCTGGCG
TTCGGCCGTG ACGAGCATGC CAGGGGCGTG CGCTGGGTCG CGCTGGTCGG CGCGATCGTG
AGCTTCCTGG TGACCGTGCC GCTTTACACG GGCTTCGAAA ACGGCACTGC CGCGATGCAG
TTCGTCGAGA AGGGCAGCTG GATCGCGCGC TTCAATGTCA ACTACCACCT GGGTGTCGAC
GGCCTGTCGC TCTGGCTGGT GCTGCTGACC TCGTTCATCA CCGTGGTGGT CGTGATCTCG
GCCTGGGAAG TGATCACCGA GCGCGTGAAC CAGTACATGG GCGCGTTCCT GATTCTCTCG
GGCTTCATGA TCGGCGTGTT CGCCGCGCTG GACGGCATCC TGTTCTACGT GTTCTTCGAA
GCCACGCTGA TCCCGATGTA CCTGATCATC GGCATCTGGG GCGGCCCGAA CAAGATCTAC
GCGGCCTTCA AGTTCTTCAT CTACACCTTG CTCGGCTCCC TGCTGATGCT GGTGGCGCTG
ATCTACCTGT ACAACAAGTC GGGCGGCAGC TTCGACATCC TGAGCTGGCA CAAGCTGCCG
CTGGGCTCGA CGGCGCAGAC CTTCCTGTTC TTCGCGTTCT TTGCCGCCTT CGCCGTCAAG
GTGCCGATGT GGCCGGTCCA CACCTGGCTG CCGGACGTGC ACGTCGAGGC GCCGACCGGC
GGCTCGGCCG TGCTGGCCGC GATCATGCTG AAGCTCGGCG CCTACGGCTT CCTGCGCTTC
TCGATGCCGA TCGCACCCGA TGCCTCGCAC GAATGGGCCT GGCTCATGAT CGCGCTGTCG
CTGATCGCGG TGATCTACGT CGGCCTGGTG GCGCTGGTGC AGGAAGACAT GAAGAAGCTC
GTGGCCTACT CGTCGGTTGC CCACATGGGC TTCGTGACGC TCGGCTTCTT CATCTTCAAC
GAGCTGGGCG TGTCCGGCGG CATCGTGCAG ATGATTGCCC ACGGCTTCGT CTCGGGCGCC
ATGTTCCTTG GCATCGGCGT GCTCTACGAC CGCGTGCATT CGCGCCAGAT CGCCGACTAC
GGCGGCGTGG TCAACACCAT GCCCAAGTTC GCCGCGTTCG CGCTGCTGTT CGCCATGGCC
AATTGCGGCC TGCCGGGCAC CGCCGGTTTC GTGGGCGAGT GGATGGTCAT CCTGGGTGCG
GTCAAGTCCA ACTTCTGGAT CGGCGCCGGC GCCGCCACCG CGCTGATCTT CGGCGCGGCC
TACACCCTCT GGATGTACAA GCGCGTGTAC CTCGGCCCGG TCGGCAACGA CCACGTCAAG
GAACTCACCG ACATCAATGC CCGCGAATTC CTGATGCTGT CGCTGCTGGC CATTGCCGTG
CTGTGGATGG GCATCCATCC GAAGCCATTC ACCGATGTGA TGGACGCTTC CGTGACCGAG
CTTCTTCGCC ATGTGGCGAT CTCGAAGCTG CCCTGA
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| Protein sequence | MGLLSLAIWV PIAFGVALLA FGRDEHARGV RWVALVGAIV SFLVTVPLYT GFENGTAAMQ
FVEKGSWIAR FNVNYHLGVD GLSLWLVLLT SFITVVVVIS AWEVITERVN QYMGAFLILS
GFMIGVFAAL DGILFYVFFE ATLIPMYLII GIWGGPNKIY AAFKFFIYTL LGSLLMLVAL
IYLYNKSGGS FDILSWHKLP LGSTAQTFLF FAFFAAFAVK VPMWPVHTWL PDVHVEAPTG
GSAVLAAIML KLGAYGFLRF SMPIAPDASH EWAWLMIALS LIAVIYVGLV ALVQEDMKKL
VAYSSVAHMG FVTLGFFIFN ELGVSGGIVQ MIAHGFVSGA MFLGIGVLYD RVHSRQIADY
GGVVNTMPKF AAFALLFAMA NCGLPGTAGF VGEWMVILGA VKSNFWIGAG AATALIFGAA
YTLWMYKRVY LGPVGNDHVK ELTDINAREF LMLSLLAIAV LWMGIHPKPF TDVMDASVTE
LLRHVAISKL P
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