Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3496 |
Symbol | |
ID | 7972121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3686276 |
End bp | 3686584 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644794080 |
Product | putative transmembrane protein |
Protein accession | YP_002945379 |
Protein GI | 239816469 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.862184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGCAAA CCGCATCGGT CTGGGTCGTT CTGCTGGTGG CGCTGCTGGC GGCCAACCTG CCGTTCTTCA ATGACCGGCT GTTCGGCGTC GTGCCCCTGG CCACGCGGCC CAAGCCTCTG GCCGTGCGGC TCGCCGAACT GGTGGTGCTG TATTTCGCCG CGGGCGGCGT GGGCTTGCTG TTCGAAAGCC GGGCAGGGCA GATCGCCCCG CAGGGCTGGG AGTTCTACGC GGTGACCGGC GCGCTTTTCA TCGTGCTGGC CTTTCCAGGG TTCACCTGGC GCTACCTCAT GAAGCACAGG CACGGATGA
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Protein sequence | MSQTASVWVV LLVALLAANL PFFNDRLFGV VPLATRPKPL AVRLAELVVL YFAAGGVGLL FESRAGQIAP QGWEFYAVTG ALFIVLAFPG FTWRYLMKHR HG
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