Gene Vapar_3496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3496 
Symbol 
ID7972121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3686276 
End bp3686584 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content67% 
IMG OID644794080 
Productputative transmembrane protein 
Protein accessionYP_002945379 
Protein GI239816469 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.862184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGCAAA CCGCATCGGT CTGGGTCGTT CTGCTGGTGG CGCTGCTGGC GGCCAACCTG 
CCGTTCTTCA ATGACCGGCT GTTCGGCGTC GTGCCCCTGG CCACGCGGCC CAAGCCTCTG
GCCGTGCGGC TCGCCGAACT GGTGGTGCTG TATTTCGCCG CGGGCGGCGT GGGCTTGCTG
TTCGAAAGCC GGGCAGGGCA GATCGCCCCG CAGGGCTGGG AGTTCTACGC GGTGACCGGC
GCGCTTTTCA TCGTGCTGGC CTTTCCAGGG TTCACCTGGC GCTACCTCAT GAAGCACAGG
CACGGATGA
 
Protein sequence
MSQTASVWVV LLVALLAANL PFFNDRLFGV VPLATRPKPL AVRLAELVVL YFAAGGVGLL 
FESRAGQIAP QGWEFYAVTG ALFIVLAFPG FTWRYLMKHR HG