| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3495 |
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| Symbol | |
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| ID | 7972120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3685665 |
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| End bp | 3686279 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794079 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_002945378 |
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| Protein GI | 239816468 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.760748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGACA TGACTTCTCC CATTGCCGAT TCGCACCTGA AGGAAGAACG CACGGCCAGC
GAGGTGCTGG TCAAGGGCAA CTTCCTCCAG GTCTGCCGCG ACACCGTGCG CCTGCCCGAC
GGCCACAGCG CCACGCGCGA GTACGTGATC CACCCGGGCG CGGTGGTGGT GATTCCGCTG
CTCGACGACG GCCGGGTGGT GCTGGAGCGG CAGTACCGCT ATCCGGTCGG GCATGTGATG
GTCGAGTTTC CGGCCGGCAA GCTCGATGCG GGCGAAGACC CGCTGGTGTG CGGCCAGCGC
GAACTGCTCG AGGAAACCGG CTACACCGCG AGCGAATGGG CCTACGCCGG GGCCATGCAC
CTGGCCGTGG CGTATTCCAC CGAGATCATC CACATCTACT TTGCGCGCGG CCTGTCGCTC
GGCAAGCGGC AGCTCGACCA CGGCGAGTTT CTCGACGTGT TCACGGCCAC GCCGGCCGAA
GTTGCGCTCT GGTGCCGCGA CGGCACGCTC ACCGATGCCA AGTCGCTGAC CTGCACGCTG
TGGCTGCAGA ACGTTCTTTC GGGTGCATGG TCACTCGATT GGCAAGCCAC CGCTTCGCAG
GGCGGCGCGG GATAA
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| Protein sequence | MTDMTSPIAD SHLKEERTAS EVLVKGNFLQ VCRDTVRLPD GHSATREYVI HPGAVVVIPL
LDDGRVVLER QYRYPVGHVM VEFPAGKLDA GEDPLVCGQR ELLEETGYTA SEWAYAGAMH
LAVAYSTEII HIYFARGLSL GKRQLDHGEF LDVFTATPAE VALWCRDGTL TDAKSLTCTL
WLQNVLSGAW SLDWQATASQ GGAG
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