| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3486 |
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| Symbol | |
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| ID | 7972111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3675392 |
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| End bp | 3676108 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794070 |
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| Product | ABC transporter related |
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| Protein accession | YP_002945369 |
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| Protein GI | 239816459 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.265059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCG CGCTCGAAAT CAAGGGCCTG CACGCCTGGT ACGGCGAATC ACACGTGCTG
CACGGCGTCG ACATGGTGGT GCAGCCCGGC GAGGTCGTCA CGCTGCTCGG GCGCAACGGC
GCGGGGCGCA CCAGCACGCT GCGCGCGATC ATGGGCCTGA CCGGCTCGCG CAAGGGCAGC
ATCGAAGTCA ACGGCGTGCA GACCATCGGC ATGGCCACGC ACCGCATCGC GCACCTGGGC
ATCGGCTATT GCCCCGAGGA GCGCGGCATC TTCGCGAGCC TCTCGGCCGA GGAAAACCTG
CTGCTGCCGC CGCCGCTCAA GAACGGCAAG GGCGTGGGGC AGGGCATGTC GGTGGCCGAG
ATCTACGAGA TGTTCCCCAA CCTGGCCGAG CGCCGCCACA GCCCGGGCAC GCGGCTGTCG
GGCGGCGAGC AGCAGATGCT CGCGGTGGCG CGCATCCTGC GCACCGGCGC CAAGCTGCTG
CTGCTCGATG AGATCTCCGA AGGCCTCGCG CCCGTCATCG TGCAGGCGCT CGCGCGGATG
ATCCACACGC TGCGCGCCAA GGGCTACACC ATCGTGATGG TGGAGCAGAA CTTCCGCTTT
GCCGCGCCGC TGGCCGACCG CTTCTACGTG ATGGAGCACG GCCGCATGGT CGAGGCCTTC
GGCGCCAAGG AACTCGACGC CAAGATGCCC GTGCTCAGCG AGCTGCTGGG CGTGTAG
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| Protein sequence | MTAALEIKGL HAWYGESHVL HGVDMVVQPG EVVTLLGRNG AGRTSTLRAI MGLTGSRKGS
IEVNGVQTIG MATHRIAHLG IGYCPEERGI FASLSAEENL LLPPPLKNGK GVGQGMSVAE
IYEMFPNLAE RRHSPGTRLS GGEQQMLAVA RILRTGAKLL LLDEISEGLA PVIVQALARM
IHTLRAKGYT IVMVEQNFRF AAPLADRFYV MEHGRMVEAF GAKELDAKMP VLSELLGV
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