Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3440 |
Symbol | dut |
ID | 7972551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3627245 |
End bp | 3627691 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644794024 |
Product | deoxyuridine 5'-triphosphate nucleotidohydrolase |
Protein accession | YP_002945323 |
Protein GI | 239816413 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0756] dUTPase |
TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGTAG ACGTTCGTAT CCTCGATCCA CGCATGGTGG ACCAATTGCC CGCCTATGCC ACGCCCGGCA GCGCAGGGCT CGATCTCCGG GCCTGCCTCG ATGCGCCCAT CACGCTGGAG CCCAACGGCT GGCAGCTCGT GGGCACCGGC ATCGCGATCC ACCTGGCCGA CCCGGCCTAT GCGGCGCTGA TCCTCCCGCG CTCGGGCCTC GGCCACAAGC ACGGCATCGT GCTCGGCAAT CTGGTGGGCC TGATCGACAG CGACTACCAG GGCGAACTCA AGATCAGCGC CTGGAACCGC AGCGACACGC CCTTCGTGCT CCAGCCGATG GAGCGGCTCG CCCAACTCGT GATCGTGCCG GTGGTGCAGG CGCAGTTTCG CGTGGTCACA GAATTTGCAG CCTCGCAACG CGGCGAAGGC GGCTACGGCT CCACCGGCAA GCACTGA
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Protein sequence | MKVDVRILDP RMVDQLPAYA TPGSAGLDLR ACLDAPITLE PNGWQLVGTG IAIHLADPAY AALILPRSGL GHKHGIVLGN LVGLIDSDYQ GELKISAWNR SDTPFVLQPM ERLAQLVIVP VVQAQFRVVT EFAASQRGEG GYGSTGKH
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