| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3434 |
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| Symbol | |
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| ID | 7972545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3623075 |
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| End bp | 3623851 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794018 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_002945317 |
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| Protein GI | 239816407 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCGCT TCCGAAGCCT CGGCAGCGGC AGCACGGGCA ACGCCGCGCT GGTGGAATCC
ACCAGCGGCG GGCGCACTTC GCGGCTCCTG GTCGACTGCG GCTTCGGCCT GCGGCAACTC
GATATTCGGC TTGCCAAGGC CGGCCTCGAA GCCGGCGACA TCGACGCGGT CTTCATCACC
CACGAGCACG GCGACCACAT CGGCTGCGCC CACTCGCTGT CGCGGCGCAG CCGCATTCCC
GTCTGGATGA GCGAAGGCAC CTGGCTGGCC ACCGGGGCCC GCGATTTCGA AGGCCGGCTC
AACCTGGCGC GGGACGATGC CGAGTTTGCG GTCGGCGACA TCGCGGTGCG GCCTTTCACC
GTGCCGCACG ATGCGCGCGA GCCGCTGCAG CTTCGCTGCT CCGACGGCGC GCGCACGCTG
GGCGTGCTGA CCGACCTCGG CCATGCCACC GCGCATGTGC TGGCCCGCCT GAGCGGCGTG
CATGCGCTGC TGCTCGAGTT CAACCACGAC AGCGAACTGC TCGCCAATTC GGCCTATCCG
GCCTTCCTGA AGCTGCGCGT TGGCGGCAGG CACGGACACC TGTCGAACGA TGCGGCCGCG
GAAATCGCAC GCGCGGTGCG CCACGACGGC CTGCGCCACG TGGTCGCGGC CCATCTGAGC
GAGCAGAACA ACCGTCCCGA CATCGTGCGG CGCCTGATGG CCGAAGCCCT CGGCGGGCAC
GAGGCCGAGA TGCTCACGGC CAGTGCGTCG GAAGGCTCGC CCTGGCTGGA CGTGTGA
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| Protein sequence | MLRFRSLGSG STGNAALVES TSGGRTSRLL VDCGFGLRQL DIRLAKAGLE AGDIDAVFIT
HEHGDHIGCA HSLSRRSRIP VWMSEGTWLA TGARDFEGRL NLARDDAEFA VGDIAVRPFT
VPHDAREPLQ LRCSDGARTL GVLTDLGHAT AHVLARLSGV HALLLEFNHD SELLANSAYP
AFLKLRVGGR HGHLSNDAAA EIARAVRHDG LRHVVAAHLS EQNNRPDIVR RLMAEALGGH
EAEMLTASAS EGSPWLDV
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