| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3432 |
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| Symbol | |
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| ID | 7972543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3620939 |
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| End bp | 3621829 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794016 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_002945315 |
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| Protein GI | 239816405 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGCAAC TGACAGGCAG CATCGTCGCT CTCGCCACGC CGATGCACGA CGACGGCAGT
GTCGACTACC CCGCCCTTCG CCGGCTGATC GACTGGCACA TCGACGAAGG CACCGATTGC
CTCGGCGTGG TCGGCACCAC CGGCGAATCG CCCACGGTCG ACGTGGAAGA GCATTGCGAG
ATCATCCGCG TGGCGGTCGA GCAGGCCAAG GGCCGCGTGC CCGTGATGGC CGGCTGCGGC
GCCAACTCGA CCAAGGAAGC CATCGAGCTC GCCAAGTTCG CCAAGGGCGT GGGCGCCGAT
TCGCAGCTGC AGGTCGTGCC CTACTACAAC AAGCCGACGC AGGAAGGCCA GTACCAGCAC
TTCAAGGCCA TCGCCGAAGC CGTGGGCGAC CTGCCCACCG TGCTGTACAA CGTGCCGGGC
CGCACCGTGG CCGATATGGC GCACGACACC GTGCTGCGCC TCGCGCAGGT GCCGGGCATC
ATCGGCATCA AGGAAGCCAC CGGCAACATC GAGCGCGCGC AGTGGCTCAT CCGCGACCTG
CCCAAGAACT TTGCCGTCTA TTCGGGCGAC GACCCCACTG CAGTCGCCCT CATGCTCTGC
GGCGGCCAGG GCAACATCAG CGTCACGGCC AACATCGCGC CGCGCAAGAT GCACGAGCTG
TGCGTGGCGG CCATCGCAGG CGATGTACGC CGCGCGATGC AGATCCAGTT CGAGCTGATG
CCGCTGCACC GCCACCTGTT CGTGGAGCCC AACCCGATCC CGCTGAAGTG GGCCATGTCC
AGGCTCGGGC TGTGCGGCGG CGCATTGCGG CTGCCGCTCA CCGAGCTGGC GGAAACGAAC
CGGCCCGTGG TCGAGGCTGC CTTGCGCGCC ACCGGCCTGC TCAAGGGCTG A
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| Protein sequence | MEQLTGSIVA LATPMHDDGS VDYPALRRLI DWHIDEGTDC LGVVGTTGES PTVDVEEHCE
IIRVAVEQAK GRVPVMAGCG ANSTKEAIEL AKFAKGVGAD SQLQVVPYYN KPTQEGQYQH
FKAIAEAVGD LPTVLYNVPG RTVADMAHDT VLRLAQVPGI IGIKEATGNI ERAQWLIRDL
PKNFAVYSGD DPTAVALMLC GGQGNISVTA NIAPRKMHEL CVAAIAGDVR RAMQIQFELM
PLHRHLFVEP NPIPLKWAMS RLGLCGGALR LPLTELAETN RPVVEAALRA TGLLKG
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