| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3407 |
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| Symbol | |
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| ID | 7972518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3595219 |
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| End bp | 3596199 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793991 |
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| Product | transglutaminase domain protein |
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| Protein accession | YP_002945290 |
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| Protein GI | 239816380 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCTTC ACGTCACGCA CGAAACCCGC TACGAGTATT CGCCCGCGGT CGAAACGGCG
CAGCACCTGG CCCACCTGAA GCCGCTGGCC ACCGCCTCGC AGCGGCTCGT GAGCCACAAG
CTCGCGATCG AGCCGCCGCC CGCGCAGCGC AGCGAAGTGC CCGACGTCTA CGGCAACACG
CGCGCCTTCT TCGCGCTCGA GGCCACGCAC GACAGCCTCG TCGTCACGGC CGAAAGCGTG
GTCGAGACCG GGGCGCCGCA GCTCGCGCCC GGCATTGCGC GCGAGCTGCC CTGGGAGGCC
GTGCGCGAGC GCTTCCGCTA CCGCAAGGAC GCCACCTTCG ACCCGGCCTC GGAGTTCGTG
TTTCCGTCGC CCTACGTGCC GCGCCACGAC GACTTCGCGG CCTATGCGCG CGCGAGCTTC
GCACCCGAGC GGCCCACCTT CGACGTGGCC ATGGACCTCA CCGAGCGCAT GTACCGCGAC
TTCGCCTACG ACGCCGACAG CACCGAGATC AACACGCCCG CCGCCGAGGC GCTGGCGCAG
CGCAAGGGCG TGTGCCAGGA CTTCGCCCAC ATCATGATCG CGTGCTTTCG CGTCATGGGC
CTGCCGGCGC GCTACGTGAG CGGCTACCTG CTCACGCAGC CGCCGCCGGG CCAGCCGCGG
CTGGTGGGCG CCGATGCCTC GCACGCCTGG GTGTCGGTCT ACCTGCCGGG CGAAGGCGAC
GGTCCTGAAA GCACCGGCGG CTGGGCCGAT TTCGACCCCA CCAACGGGCG CCAACCCGGC
GAAGACTATG TCGCGCTCGC CATCGGCCGC GACTACTCCG ACGTCTCGCC GATGCGCGGC
GTGCTGCACG GCGGCGCGCG CCACACGCTC AAGGTGGGCG TGACGGTGCG TCCCATCGAG
GAGCTGCGCG CGCAGGCCGA AGAGGCAGCG CAGTCACAAT CACAGACTCC ATCGCAACCC
ACTGAAAAGG ATCTTCAATG A
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| Protein sequence | MLLHVTHETR YEYSPAVETA QHLAHLKPLA TASQRLVSHK LAIEPPPAQR SEVPDVYGNT
RAFFALEATH DSLVVTAESV VETGAPQLAP GIARELPWEA VRERFRYRKD ATFDPASEFV
FPSPYVPRHD DFAAYARASF APERPTFDVA MDLTERMYRD FAYDADSTEI NTPAAEALAQ
RKGVCQDFAH IMIACFRVMG LPARYVSGYL LTQPPPGQPR LVGADASHAW VSVYLPGEGD
GPESTGGWAD FDPTNGRQPG EDYVALAIGR DYSDVSPMRG VLHGGARHTL KVGVTVRPIE
ELRAQAEEAA QSQSQTPSQP TEKDLQ
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