| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3395 |
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| Symbol | |
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| ID | 7970633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3574683 |
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| End bp | 3575753 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793979 |
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| Product | ABC transporter related |
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| Protein accession | YP_002945278 |
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| Protein GI | 239816368 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.471192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGCA TCGATCTCGA CCTGGCCCAC GCCTACCGCC CCAACCCGAA GCAGGACAGC
GACTATGCGC TGCTGCCGCT CAAGATGAGC TTCCGCGATG GTGGCGCGTA CGCCTTGCTC
GGCCCCTCGG GCTGCGGCAA GACGACCATG CTCAATATCA TCTCGGGCCT GCTGGTGCCG
TCGCAGGGCA CGGTGACCTT CGATGGCCGC GACATGACGC GCGCCACGCC GCAGGAACGC
AACATCGCGC AGGTGTTCCA GTTTCCGGTG ATCTACGACA CCATGACCGT GGCCGAGAAC
CTCGCGTTTC CGCTGCGCAA CCGCAAGGTG CCCGAAGACC AGATCAGGAA GCGCGTGGGC
GAGATTGCCG AAATGCTCGA CATGAGCGGG CAGCTGAACC AGCGCGCCTC GGGCCTCGCG
GCCGATGCCA AGCAGAAGAT CTCGCTCGGC CGCGGCCTGG TGCGCAGCGA CGTCTCGGCG
GTGCTGTTCG ACGAGCCGCT GACGGTGATC GATCCGCACC TCAAGTGGCA GCTGCGCCGC
AAGCTCAAGC AGATCCACCG CGAGCTCAAG CTCACGCTGA TCTACGTGAC GCACGACCAG
GTCGAGGCGC TCACCTTCGC CGAAGAGGTG GTGGTGATGA CGCGCGGCAA GGCCGTGCAG
GTGGGCAGCG CCGAGGCGCT GTTCGAGCGG CCGGCGCATA CCTTCGTCGG CCACTTCATC
GGCTCGCCGG GCATGAACTT TCTTTCGGCG AAGAGCGCGA ACGGCGCGCT CGAGGTGGCG
GGCACGCCGC TCGTGCCGAC GCGCGAACTG CCGCAGGGCG CGCTCAAGAT CGGCATCCGG
CCCGAGTACC TGCGCCTGTC GAACGCGGGC GCCGCCGGCG CCGTGCCGGC CGTGGTGAAG
CAGGTGCAGG ACGTCGGCAC GCACGCCATG CTGAGCGCCG AGGTCGACGG CGGCGTGGTC
AAGGTGCGCC TGCACTCGGA CGACCAGCCG CCGGCCGTGG GCGACACCGT GTGGCTGCGG
GTGCTCGACA CCCACACCTG CTTCTACAAG GACGAGGAGC TGGTCGCATG A
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| Protein sequence | MARIDLDLAH AYRPNPKQDS DYALLPLKMS FRDGGAYALL GPSGCGKTTM LNIISGLLVP
SQGTVTFDGR DMTRATPQER NIAQVFQFPV IYDTMTVAEN LAFPLRNRKV PEDQIRKRVG
EIAEMLDMSG QLNQRASGLA ADAKQKISLG RGLVRSDVSA VLFDEPLTVI DPHLKWQLRR
KLKQIHRELK LTLIYVTHDQ VEALTFAEEV VVMTRGKAVQ VGSAEALFER PAHTFVGHFI
GSPGMNFLSA KSANGALEVA GTPLVPTREL PQGALKIGIR PEYLRLSNAG AAGAVPAVVK
QVQDVGTHAM LSAEVDGGVV KVRLHSDDQP PAVGDTVWLR VLDTHTCFYK DEELVA
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