Gene Vapar_3283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3283 
Symbol 
ID7973679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3458100 
End bp3458669 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content71% 
IMG OID644793868 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_002945167 
Protein GI239816257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.038205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGGCC TTGATGTCGC CCTGTTCGCG CTGATCAACG CCAGTGCCGC GGCGCCGGCG 
TGGAGCATCC ATTTCGCTCG CTTCGCGTCC GACGTGCTGC CGGCGCTGCT GGCCGCCGCG
ATCATCGGCG CCGCGGTGGT CGACCGCCGC CTGCGCTATG CCTGCTTCAC CGCGCTGGTC
AGTGTGCTGG CGGTCTGGAT CTTCGTGAAC GTGTTCCGCT CGGCCATGCC GTTCCAGCGG
CCCGCCTTCT ACGGGCTGGG AATCCAGTGG GCGCCGCAAG GCGCGCGGCC GGGCTTTCCG
AGTCTGCATG CCGCCTGCAC CTTCGCGGCG GCGTTCTCGC TGTGGTGCCT GCCGTGGCGC
GCGCCCATGC TGGCGGCGCT GGCGGTGGCC GCGGTGGTCG GCTGGAGCCG TGTGTTCCTG
GGGCTGCACT TTCCGTTCGA CGTGGTCGCG GGGGTGATGC TGGCCGCCCT GGTGTCGATC
GTGGTGGAGC GCGGCGTCAG CCGTCCGCTC AACCTGGCGC TCAGGGCCTT CATGCGGCCC
CGCTTGAGGG CGAGACGGGC GCGAACCTGA
 
Protein sequence
MQGLDVALFA LINASAAAPA WSIHFARFAS DVLPALLAAA IIGAAVVDRR LRYACFTALV 
SVLAVWIFVN VFRSAMPFQR PAFYGLGIQW APQGARPGFP SLHAACTFAA AFSLWCLPWR
APMLAALAVA AVVGWSRVFL GLHFPFDVVA GVMLAALVSI VVERGVSRPL NLALRAFMRP
RLRARRART