Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3283 |
Symbol | |
ID | 7973679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3458100 |
End bp | 3458669 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644793868 |
Product | phosphoesterase PA-phosphatase related |
Protein accession | YP_002945167 |
Protein GI | 239816257 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.038205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGGCC TTGATGTCGC CCTGTTCGCG CTGATCAACG CCAGTGCCGC GGCGCCGGCG TGGAGCATCC ATTTCGCTCG CTTCGCGTCC GACGTGCTGC CGGCGCTGCT GGCCGCCGCG ATCATCGGCG CCGCGGTGGT CGACCGCCGC CTGCGCTATG CCTGCTTCAC CGCGCTGGTC AGTGTGCTGG CGGTCTGGAT CTTCGTGAAC GTGTTCCGCT CGGCCATGCC GTTCCAGCGG CCCGCCTTCT ACGGGCTGGG AATCCAGTGG GCGCCGCAAG GCGCGCGGCC GGGCTTTCCG AGTCTGCATG CCGCCTGCAC CTTCGCGGCG GCGTTCTCGC TGTGGTGCCT GCCGTGGCGC GCGCCCATGC TGGCGGCGCT GGCGGTGGCC GCGGTGGTCG GCTGGAGCCG TGTGTTCCTG GGGCTGCACT TTCCGTTCGA CGTGGTCGCG GGGGTGATGC TGGCCGCCCT GGTGTCGATC GTGGTGGAGC GCGGCGTCAG CCGTCCGCTC AACCTGGCGC TCAGGGCCTT CATGCGGCCC CGCTTGAGGG CGAGACGGGC GCGAACCTGA
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Protein sequence | MQGLDVALFA LINASAAAPA WSIHFARFAS DVLPALLAAA IIGAAVVDRR LRYACFTALV SVLAVWIFVN VFRSAMPFQR PAFYGLGIQW APQGARPGFP SLHAACTFAA AFSLWCLPWR APMLAALAVA AVVGWSRVFL GLHFPFDVVA GVMLAALVSI VVERGVSRPL NLALRAFMRP RLRARRART
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