| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3277 |
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| Symbol | |
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| ID | 7973673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3451822 |
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| End bp | 3452607 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793862 |
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| Product | ethanolamine ammonia-lyase small subunit |
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| Protein accession | YP_002945161 |
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| Protein GI | 239816251 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4302] Ethanolamine ammonia-lyase, small subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.159313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGG ACGCCGTCAC GCCGAATCCC TGGGCGCAGT GGCGTTCGGC CACGCCCGCG
CGCCTGGCGC TGGGCCGCGC CGGCGCCGGC ATACCGACGG ACGAGACGCT GCGCTTCGGC
TGGGCCCATG CGATGGCGCG CGATGCCATT CATGCGGCGC TCGACGTCGA TGCACTCGAA
GCCACGCTGC AACAACAGCA TTGGCAGGTG ATGCGGGCGC GCAGCCGCGC CGAAGACCGC
ACCACCTACC TGCGCCGCCC CGACCTGGGG CGGCAGCTCG ACCCCGCGGA TGCGCAGCGC
CTGCGGGCCG CCGCAAAAGG CGATTGCGAT GTCTGCCCTG TCATCGGCGA CGGCCTCTCC
TCGCTCGCGG TGGCGCGCCA TGCCGCCCCG CTGCTGGCCG CGCTGCGCGC TCAATTGCCG
CCCGAGACGC GCTTTTCTCC CGTGGTCATC GCCACCCAGG CGCGCGTGGC GCTGGCCGAC
GAGGTCGGCG AGCTGTTCGG CGCGGCGCTC TCGGTGATGC TGATTGGCGA GCGCCCGGGG
CTCAGCTCGC CGGACAGCCT CGGCATCTAC TTGACCCATT CGCCGAAGCG CGGCCGCCAC
GACGCCGAGC GCAACTGCAT CTCGAACGTG CGCCCCGAAG GCCTGCCCTG CGAAGCCGCC
GCATTCAAGC TGGCCTGGCT GATGCGCGAG GCCCTTCGCC GGGGGCTGAC CGGCGTCGGG
CTCAAGGACG AGAGCGATCT TGCGGTGCTC GAGCCGGGCC GTCCGGCAAC GACCCTGCCT
GGCTGA
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| Protein sequence | MSKDAVTPNP WAQWRSATPA RLALGRAGAG IPTDETLRFG WAHAMARDAI HAALDVDALE
ATLQQQHWQV MRARSRAEDR TTYLRRPDLG RQLDPADAQR LRAAAKGDCD VCPVIGDGLS
SLAVARHAAP LLAALRAQLP PETRFSPVVI ATQARVALAD EVGELFGAAL SVMLIGERPG
LSSPDSLGIY LTHSPKRGRH DAERNCISNV RPEGLPCEAA AFKLAWLMRE ALRRGLTGVG
LKDESDLAVL EPGRPATTLP G
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