| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3271 |
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| Symbol | |
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| ID | 7973667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3444146 |
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| End bp | 3445654 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793856 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_002945155 |
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| Protein GI | 239816245 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.190179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAC AGATCGCGCA TTTCATCGGC GGCCAGCACG CCGCCGGCAG CTCCACCCGC
ACGCAGGACG TCACCAACCC CGCGACCGGC AAGGTCACGG GCAAGGTGGC GCTGGCCGTC
CAGGCCGACG TCGATGCCGC GGTGGCCGCC GCGCAGGCCG CCTTTCCCAA GTGGGCCGAC
ACGCCGCCGA TCCGCCGCGC CCGCGTGATG TTCAAGTTTT TGGAGCTGCT CAACCTGCAC
AAGGACGAAC TCGCGCACAT GATCACCGCC GAGCACGGCA AGGTGTTCAC CGACGCGCAG
GGCGAGGTCT CGCGCGGCAT CGACATCGTC GAATTCGCCT GCGGCATTCC GCAGCTGCTC
AAGGGCGACT TCACCGACCA GGTCTCCACC GGCATCGACA ACTGGACGCT GCGCCAGCCG
CTGGGCGTGG TGGCCGGCAT CACGCCCTTC AACTTTCCGG TGATGGTGCC GATGTGGATG
TTCCCGGTGG CCATTGCCGC GGGCAACACC TTCATTCTCA AGCCCAGCCC GACCGACCCG
ACCCCGTCGC TGCGCATGGC CGAACTGCTG AAGGAAGCGG GCCTGCCCGA CGGCGTGTTC
AACGTGGTGC AGGGCGACAA GGTGGCGGTC GATGCGCTGC TCGAGCACCC CGACGTCAAG
GCCGTGAGCT TCGTGGGCTC CACGCCCATT GCCAACTACA TCTACGAAAC CGGCGCGCGC
AACGGCAAGC GCGTGCAGGC CCTTGGCGGC GCGAAGAACC ACATGGTGGT GATGCCCGAC
GCCGACATCG ACCAGACGGT GGACGCACTG ATCGGCGCGG GCTACGGCTC GGCCGGCGAG
CGCTGCATGG CGATCAGCGT GGCGGTGCTG GTGGGCGACG TGGCCGACAA GATCATTCCC
AAGCTCATCG AGCGCACGAA GACGCTCAAG GTGCTCGACG GCGAGAACCT CGCGGCCGAA
ATGGGCCCGA TCGTCACGCG CGCGGCACAC GAGCGCATCA CCGGCTACAT CGCCCAGGGC
GAGAAGGAAG GCGCGAAGCT GCTGGTCGAC GGCCGCCAGT TCGACGGCGG CCAGGCCGGT
GCCGGCTGCG GCGACGGCTT CTGGATGGGC GGCACGCTGT TCGACCACGT CACGCCCGAG
ATGCGCATCT ACAAGGAAGA GATCTTCGGC CCGGTGCTCT CCTGCGTGCG CGTGGCCAAC
TTCAAGGACG CGGTCGACCT GGTCAACGAC CATGAATTCG GCAATGGCGT GAGCTGCTTC
ACGCGCGACG GCAATGTGGC GCGCGAGTTC AGCCGCCGCA TCCAGGTGGG CATGGTCGGC
ATCAACGTGC CGATCCCGGT GCCGATGGCA TGGCACGGCT TCGGCGGCTG GAAGCGCAGC
CTGTTCGGCG ACATGCATGC CTACGGCGAG GAAGGCGTGC GCTTCTACAC CAAGCAGAAG
TCGATCATGC AGCGCTGGCC CGAGAGCATT GGCAAGGGCG CCGAGTTCGT GATGCCCACC
GCCAAGTAA
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| Protein sequence | MTTQIAHFIG GQHAAGSSTR TQDVTNPATG KVTGKVALAV QADVDAAVAA AQAAFPKWAD
TPPIRRARVM FKFLELLNLH KDELAHMITA EHGKVFTDAQ GEVSRGIDIV EFACGIPQLL
KGDFTDQVST GIDNWTLRQP LGVVAGITPF NFPVMVPMWM FPVAIAAGNT FILKPSPTDP
TPSLRMAELL KEAGLPDGVF NVVQGDKVAV DALLEHPDVK AVSFVGSTPI ANYIYETGAR
NGKRVQALGG AKNHMVVMPD ADIDQTVDAL IGAGYGSAGE RCMAISVAVL VGDVADKIIP
KLIERTKTLK VLDGENLAAE MGPIVTRAAH ERITGYIAQG EKEGAKLLVD GRQFDGGQAG
AGCGDGFWMG GTLFDHVTPE MRIYKEEIFG PVLSCVRVAN FKDAVDLVND HEFGNGVSCF
TRDGNVAREF SRRIQVGMVG INVPIPVPMA WHGFGGWKRS LFGDMHAYGE EGVRFYTKQK
SIMQRWPESI GKGAEFVMPT AK
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