| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3255 |
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| Symbol | |
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| ID | 7973651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3430158 |
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| End bp | 3431312 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793840 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002945139 |
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| Protein GI | 239816229 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.616941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTCG AATTGTCCGA AGAGCAGAAC GCCTTTGCGC AGACCGCGCG CGATTTTGCA
CAGGCCGAGT TCGCACCGCA TGCGGCGCGG TGGGACGCCG AGGCCATCTT CCCGAAGGAG
GCCATCGCCA AAGCCGGCGA GCTGGGCTTT TGCGGCCTGT ACGCGCCCGA GCGCATCGGC
GGCCTCGGCC TGCCGCGGCT CGACTCGGCG CTGGTGTTCG AGGAGATGGC CGCGGTCGAC
CCCTCGACCA CGGCCTTCAT CACGATCCAC AACATGGCGA CCTGGATGCT CGGCACCTGG
GCGACCGATG CGGTGGCGCA GCAGTGGGGC GAAGACCTCA CGAGCGGGCG CAAGCTGGCT
TCCTACTGCC TCACCGAGCC GGGCGCCGGG TCGGATGCGG GCTCGCTCAA GACGCGCGCC
GAGCTGCAGG GCGCCGAGTA CGTCATCAAT GGCGGCAAGG CCTTCATTTC GGGCGCCGGC
TCGACCGACG TGCTGGTGCT CATGGCGCGC ACGGGCGGCG GCGGCGCGGG CGGCATCTCG
GCCTTTGCGG TGCCGGCCGA TGCACCCGGC GTGAGCTATG GCAAGAAGGA GCACAAGATG
GGCTGGAACA GCCAGCCCAC GCGCACCATC AACTTCGACA ACGTGCGCGT GCCGGCCGAG
AACCTGCTGG GCAAGGAAGG CGAGGGCTTC CGCATTGCGA TGAAGGGGCT CGATGGCGGG
CGCATCAACA TCGCGACCTG CTCGGTGGGC GCGGCGCAGG GCGCGCTCGA TGCGGCGCGC
CGCTACCTGC ACGAACGCCA GCAGTTCGGC AAGCCGATCG CGAGCTTCCA GGCGCTGCAG
TTCAAGCTGG CCGACATGGC GACCGAACTG GTTGCGGCGC GGCAGATGGT GCGGCTCGCG
GCAAGCAAGC TCGATGCGGG CCATGCCGAT GCCAGCACCT ACTGCGCCAT GGCCAAGCGC
TTTGCGACCG ATGCGGGCTT CAACGTCTGC AATGACGCAC TGCAGCTGCA CGGCGGCTAC
GGCTACCTGA GCGAATTCCC GCTCGAGCGC CTGGTGCGCG ACACCCGCGT GCACCAGATC
CTCGAAGGCA CCAACGAGAT CATGCGCGTG ATCGTTGCGC GAAAATTGCT GGAAGGGGAC
AGCGATATCC GCTGA
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| Protein sequence | MNFELSEEQN AFAQTARDFA QAEFAPHAAR WDAEAIFPKE AIAKAGELGF CGLYAPERIG
GLGLPRLDSA LVFEEMAAVD PSTTAFITIH NMATWMLGTW ATDAVAQQWG EDLTSGRKLA
SYCLTEPGAG SDAGSLKTRA ELQGAEYVIN GGKAFISGAG STDVLVLMAR TGGGGAGGIS
AFAVPADAPG VSYGKKEHKM GWNSQPTRTI NFDNVRVPAE NLLGKEGEGF RIAMKGLDGG
RINIATCSVG AAQGALDAAR RYLHERQQFG KPIASFQALQ FKLADMATEL VAARQMVRLA
ASKLDAGHAD ASTYCAMAKR FATDAGFNVC NDALQLHGGY GYLSEFPLER LVRDTRVHQI
LEGTNEIMRV IVARKLLEGD SDIR
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