| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3249 |
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| Symbol | |
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| ID | 7973645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3424669 |
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| End bp | 3425595 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793834 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002945133 |
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| Protein GI | 239816223 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.930143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCAGT CGATCCTGGA GATACGCCAC CTGCGCACGC TCGTTGCGCT GCGCGACACC
GGCAGCCTGG TGCGCGCGGC GCAGTTGCTG AACCTCACGC AGTCGGCGCT GTCGCACCAG
ATCAAGCTGC TCGAAGACCG CTACGGCGCG CAGCTCTTCG AGCGCAAGTC GGTGCCGCCG
CAGTTCAGCA CCACGGGACT GCGGCTGTTG CAGCTGGCCG ATGCCGCGCT GCCGCTGGTG
GAGGAAGCCG AGCGCGACGT GGCGCGTCTG GCGCTGGGCC GCAGCGGGCA GCTGCGCATC
GTGGTCGAAT GCCACACCTG CTTCGACTGG CTGATGCCGG CCATGGATGC CTTCCGCCAG
CGCTGGCCCG AGATCGAGCT GGACATCGTC TCGGGCTTCC ACCCTGACCC GATCGCGCTG
GTGATGCAGA ACCGCGCCGA GGTGGCGATC GTCTCCGAGC AGGACCCCGA CGAAACCGTG
GACTACCACG CGCTGTTCCG CTTCGAGATC GTCGCGCTGC TCGCCAACGA CCATGCGCTG
ACAGCCAAGC CGCATCTCAC GGCGCGCCAC TTTGCCGGCC AGACGCTCAT CACCTACCCC
GTGCCCGACG AGATGCTGGA CATCGTGCGC CAGGTGCTGG CGCCGGCCGG CGTGGCGCCC
GCGCACCGGC GCACGACCGA ACTCACGGTG GCGATGCTGC AGCTGGTGGC CAGCGGGCGC
GGCGTAGCCA CGCTGCCGTT GTGGGCGGTT CAGAACTACC TGGACCGCGG CTATGTCACG
GCGCGGCGCG TGGGCGCCCG GGGCCTCACG GGGCGGCTGT ACATGGCCTG CACGCAGGGC
ACGTCCAATC AGCCGTGGCT GGCGGACTTC GTGCGCATCA CGCGCGAGAG CTGCTTCAAG
AGCCTGCCCG GGATCGAGCT GCTTTGA
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| Protein sequence | MLQSILEIRH LRTLVALRDT GSLVRAAQLL NLTQSALSHQ IKLLEDRYGA QLFERKSVPP
QFSTTGLRLL QLADAALPLV EEAERDVARL ALGRSGQLRI VVECHTCFDW LMPAMDAFRQ
RWPEIELDIV SGFHPDPIAL VMQNRAEVAI VSEQDPDETV DYHALFRFEI VALLANDHAL
TAKPHLTARH FAGQTLITYP VPDEMLDIVR QVLAPAGVAP AHRRTTELTV AMLQLVASGR
GVATLPLWAV QNYLDRGYVT ARRVGARGLT GRLYMACTQG TSNQPWLADF VRITRESCFK
SLPGIELL
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