| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3163 |
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| Symbol | |
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| ID | 7973395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3325683 |
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| End bp | 3326675 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793747 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945047 |
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| Protein GI | 239816137 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGAC GCCTTTCCCT TTCCCTTGTG TCCGCCGCGC TGTCGGCCTT TGCCATCGCC
TCGCCCGCGC AGGCGCAGGG CGAGGTGCAG AAGCAACTCT CGAGCGAGCG CTTCACCATC
GTCTCGCCGT TCCCGCCCGG CGGTCCGGTC GACACGCTGG CGCGCGTGCT TTCAGACGGG
CTCGCCAAGC GCTACGGCCA GGCCGCGGTG GTCGAGAACC TGGTCGGCGC GGCCGGCAAC
ATCGGCATCG ACAAGGTCAA GCGCGCCAAG GGCGACGGCC ACACGCTGCT CGTGGTGCCC
GCGGGCAACC TCACGATCAA CCCCACCTTG ATGCCGAACT TCCCGTTCGA CATCGAGAAG
GACTTCGTGC CCGTCACCAT GCTGGCCAAG GCGCCCAACG TGCTGGTGGC CTCGCCCTCG
TCGGGCATCA GGAGCGCGAA GGAGCTGGTG GCGCGGGCCA AGGCCAAGCC CGATTCGCTC
TCGTACGCCT CGCCCGGCGT GGGCAGCGGC CTGCACCTGG CGGGCGAGCT GTTCAAGCAG
CAGGCCGGCA TCGAGATGCT GCACGTACCC TACAAGGGCA CCGCGCCCGC GCTCAACGAC
GTGCTCGGCG GCGCGGTGCC GCTGATGTTC AGCAACCTGC CCGCGACCAT GCCCTTCATC
AAGAACGGCA AGCTGGTGGC GCTGGGCGTG ACCGAGGCCG CGCGCAGCCC GGCCGCGCCC
GACATTCCGA CGCTGGCGGA GCAGGGCATC CAGGGCGTGG CCGTGACCTC GTGGTATGGC
CTGCTGGCGC CCAAGGGCAC GCCGCCCGCC GTGGTCGAGC AGCTCGCGAA AGACGCCGCG
GAGATGCTGG CGCAGCCCGA CGTGCGCGAG CGCCTGAAAG CGCAAGGCAT GACGGATGCA
GCGATGAAGC CGGCCGCGTT TGCCGCGCAC ATCCGCGAAG AAACAGCCGT GTGGGCCAGG
ATCATCAAGG CCCGCAACAT CGTGGCCGAG TGA
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| Protein sequence | MQRRLSLSLV SAALSAFAIA SPAQAQGEVQ KQLSSERFTI VSPFPPGGPV DTLARVLSDG
LAKRYGQAAV VENLVGAAGN IGIDKVKRAK GDGHTLLVVP AGNLTINPTL MPNFPFDIEK
DFVPVTMLAK APNVLVASPS SGIRSAKELV ARAKAKPDSL SYASPGVGSG LHLAGELFKQ
QAGIEMLHVP YKGTAPALND VLGGAVPLMF SNLPATMPFI KNGKLVALGV TEAARSPAAP
DIPTLAEQGI QGVAVTSWYG LLAPKGTPPA VVEQLAKDAA EMLAQPDVRE RLKAQGMTDA
AMKPAAFAAH IREETAVWAR IIKARNIVAE
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