| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3141 |
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| Symbol | |
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| ID | 7974351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3300688 |
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| End bp | 3301389 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644793726 |
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| Product | urea ABC transporter, ATP-binding protein UrtE |
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| Protein accession | YP_002945026 |
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| Protein GI | 239816116 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACA TCATGCTGAA GGTAGAAGAC CTCCACGTAG CCTACGGCCA GAGCGAGGCC
CTGCACGGCA TCTCTTTCGA AGGCCATGCC AACGAAACAA TAGCCGTCAT GGGCCGCAAC
GGCATGGGCA AGACCACGCT GTTCAAGAGT TTGATGGGCG TGCTTCCCAT CAAGAGTGGC
CGCATCGAAG TGGCGGGACA GGATGTATCG CGCGACGAAA GCTTCAGGCG CGTGGCCAAG
GGCATTGCCT ATGTGCCGCA GGGCCGCATG ATCTTCCCGA CTCTGACTGT GGAAGAGAAC
ATCCAGACAG GCCTCGAGAA CTCGAAGACA AAACGCATCC CCGAAGAGAT ATACGCCTTG
TTCCCCGTGC TCTGGGACAT GAAACGCCGC AAAGGCGGCA ACCTCTCGGG CGGCCAGCAA
CAGCAGCTTG CCATTGCGCG CGCCCTCGTC ACCGACCCCA AGGTGCTGCT GCTCGACGAG
CCCACCGAAG GAATCCAGCC TTCGATCATC AAGGACATTG CCAAGGCCCT CAACGAGATC
CGCAAGCTGC GCGGCATCAC CATCGTCGTG TCCGAGCAGG TGCTGAGCTT TGCCATGGAC
GTGGCCGACC GGCTCTTCGT GATCGAAGGC GGGCGCCTCG TGCACGAGAC CGCGCGCGAC
AAGACCGATG TGGATCACAT CAAAGCCTAC CTCTCCGTTT AA
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| Protein sequence | MSNIMLKVED LHVAYGQSEA LHGISFEGHA NETIAVMGRN GMGKTTLFKS LMGVLPIKSG
RIEVAGQDVS RDESFRRVAK GIAYVPQGRM IFPTLTVEEN IQTGLENSKT KRIPEEIYAL
FPVLWDMKRR KGGNLSGGQQ QQLAIARALV TDPKVLLLDE PTEGIQPSII KDIAKALNEI
RKLRGITIVV SEQVLSFAMD VADRLFVIEG GRLVHETARD KTDVDHIKAY LSV
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