Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3131 |
Symbol | |
ID | 7974341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3290290 |
End bp | 3291057 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644793716 |
Product | class II aldolase/adducin family protein |
Protein accession | YP_002945016 |
Protein GI | 239816106 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.22582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAA ACACCCAATC CGAAATCCAG AAGCTCGTCT CCGCCGAGGA GTGGCAGCTG CGCGTCGACC TTGCCGCCTG CTACCGCCTG GTGGCGCTCT ACGGCTGGAG CGACCTGGTC TTCACCCACA TCAGTGCGCG CATTCCCGGG CCCGAGCACC ACTTCCTGAT CAACCCCTAC GGCCTGATGT TCGACGAGAT CACCGCGTCG AGCCTGGTCA AGGTCGACCA GCAGTGCAAC AAGATCATCG ACTCGCCCTA CCCCGTGAAC CCGGCCGGCT TCGTGATCCA CAGCGCCGTG CATGCGGCGC GCGAAGACAT CCAGTGCGTG CTGCACACCC ACACCAAGGC CGGCATTGCC GTGAGCGCGC AGAAGAACGG CGTGCTGCCC ATCAGCCAGC AGTCGACCTT CGTGCTGGCG TCGCTCGCCT ACCACGACTA CGAAGGCGTG GCCTTCCGCG ACGACGAGAA GCCGCGCCTG CAGGCCGACA TGGGCAACGC CAATTTCCTG ATGCTGCGCA ACCACGGCCT GCTGACTTGC GGCAAGACCA TTGCCGACGC TTTCCTTTCG ATGTACACCT TCGAGAACAC CTGCCAGATC CAGATCGCCG CGCAATCGGG CGGCGGCGAA CTCACGCAGG TGAACCCCAA GATCGTCGAG GGCGTGGGCC AGGCGATGAA GGTGCAGACC GGCGGCCTGG GCGGGCAGTT CGTCTGGCCC TCGCTGATCC GCAAGCTCGA CCGCATCGAC GACAGCTACA AGCAATAA
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Protein sequence | MNANTQSEIQ KLVSAEEWQL RVDLAACYRL VALYGWSDLV FTHISARIPG PEHHFLINPY GLMFDEITAS SLVKVDQQCN KIIDSPYPVN PAGFVIHSAV HAAREDIQCV LHTHTKAGIA VSAQKNGVLP ISQQSTFVLA SLAYHDYEGV AFRDDEKPRL QADMGNANFL MLRNHGLLTC GKTIADAFLS MYTFENTCQI QIAAQSGGGE LTQVNPKIVE GVGQAMKVQT GGLGGQFVWP SLIRKLDRID DSYKQ
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