| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3126 |
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| Symbol | |
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| ID | 7974336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3285899 |
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| End bp | 3286822 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793711 |
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| Product | Glutamate--tRNA ligase |
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| Protein accession | YP_002945011 |
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| Protein GI | 239816101 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.216069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGAGA CCGGCCGTTT CGCGCCCTCG CCCACCGGCC CGCTGCATGC CGGCTCGCTG
GTGGCCGCGC TCGCAAGCTG GCTCGACGTG CGCGCGCGCG GCCCGAAGGC GCGCTGGCTG
ATCCGCATCG AGGACGCCGA CACCGAACGC TGCCTGCCCG GCATGGGCGA GCACATCCTT
GGGCAACTGG CCGACTGCGG CCTGCTGCCC GACGAAGCGC CGCTGTGGCA GACGCAGCGC
ACCGAGCGCT ACGAAGCCGC GCTGGCAAGG CTGCGGGCCC TCGGCCTTGC CTACCCCTGC
GGCTGCTCGC GCAAGGACAT CGACGAGGCG CTGGCACGGC TCGGCCGGCC GCACACGCGC
CATGGCGAGC GGGTCTACCC CGGCACCTGC CGCGACGGCC TGCACGGCAA ACCCGCACGC
GCCTGGCGCT TTGCCACCGA GAAATTCGAA TCGGCCCAGC CGGCCTTGGC CCATGGCGAA
CTCTGCTGGA CCGACCGCCG CCTTGGCCGC CAGTGCCAGG ACGTGAGCCG CGAGGTTGGC
GACTTCGTGC TGCGTCGCGC CGATGGCCCC TGGGCCTACC AGCTTGCGGT GGTGGTCGAC
GACGCGGAAC AGGGCGTGAC CGACGTGGTG CGCGGCGAAG ACCTGGCCGA CAACACCGCG
CGCCAGATCC TGTTGCAGCG CGCACTCGGC CTGCCCACGC CCAGCTACCT GCACACGCCG
CTGGTGCGCG GCGCCGACGG CGACAAGCTC TCCAAGCAGA ACGGCGCCAC CGCCATCGAC
ACCGCCACGC CAGAGGCTGC CCTGGCCGCC CTCGACGCGG CCGCGCGCGT GCTCGGCCTG
CGCGCCACCA CGGCCGCTTC CTGCGCGCCT GCATTGGCCG GCTGGGTGCC CGAATGGCGC
GATCTCTACA ATTCGCGGCC GTAA
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| Protein sequence | MRETGRFAPS PTGPLHAGSL VAALASWLDV RARGPKARWL IRIEDADTER CLPGMGEHIL
GQLADCGLLP DEAPLWQTQR TERYEAALAR LRALGLAYPC GCSRKDIDEA LARLGRPHTR
HGERVYPGTC RDGLHGKPAR AWRFATEKFE SAQPALAHGE LCWTDRRLGR QCQDVSREVG
DFVLRRADGP WAYQLAVVVD DAEQGVTDVV RGEDLADNTA RQILLQRALG LPTPSYLHTP
LVRGADGDKL SKQNGATAID TATPEAALAA LDAAARVLGL RATTAASCAP ALAGWVPEWR
DLYNSRP
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