Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3081 |
Symbol | |
ID | 7974290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3237150 |
End bp | 3238103 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644793665 |
Product | alpha-L-glutamate ligase, RimK family |
Protein accession | YP_002944966 |
Protein GI | 239816056 |
COG category | [H] Coenzyme transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCGCATCG TCATCATGAC GGACGAGATC GGCTGGCACA CGCGCCAGCT GCAGGCCGCG CTGCGCGCAC GCGGCGCGGT GGGGCGCTGC GTCGACCTGG CCGACTGCAA CATCGACACC ACTGCCGCAT GGCATGGCCT GGTCATTCCC GGCTATGGCC GCGAGCTGCC CGATGCAGTG CTGGTGCGCG GCATTGCCGG CGGAAGCTTC GAGCAGGTCA CCAAGCGCCT GGGCGTGCTG CATGCCTTGC GCGAACTGGG CGTGCCGGTC TACAACGACG CGCGCGCCAT CGAGCGCACG GTCGACAAGT CGATGACCAG CCTGCTGCTG CATGCCGCGC GCATTCCCGC GCCTGCCACC TGGGCCACCG AATCGGCGGC GCAGGCGCGG CGCATCGCGA TGCGCGAAAT GGCCGCGGGC CATGCACTGG TGCTCAAGCC CTTGTTCGGT TCGCAGGGCA AGAACCTGCA ACTGGTGAGA GAGGTCGACG GCGTCCATCA TCCGATGCCC GACATCGATG CGCGCTACGC GGGCCTGGCC TATCTGCAGC GCTTCGTGCC GCCCATGGGT TCGCCGGGCT TCGACTGGCG CGTGATGGTG GTGGGCGGAC GCGCCGTCAC CGCGATGCGG CGCGTCAGCA TGCACTGGAT CCACAACGTG GCCCAGGGCG CGCGCTGCGA GCCGGCCGTG CTGGAGCCCG CGCTCGCGCA ACTGGCCGAA GGCGCGGCGC AGGCGCTGGA CATGGACTAC GCGGGCGTGG ACCTCATCGC GGCGGCCAGC GGGCCGAAGA TCCAGGTGCT CGAGGTCAAT GGCGTGGCCG CCTGGCAGGG GCTGCAGCGC GTGACGGGCT TCAACATTGC GCGCGCCATC GTCGACGACC TGCTCGACCG CAAGCTCGCG CAGGCGCGCC GCCTCGTGCA GCAGAACCTG CCGCCGCCGG AGCGCCGCGC CTGA
|
Protein sequence | MRIVIMTDEI GWHTRQLQAA LRARGAVGRC VDLADCNIDT TAAWHGLVIP GYGRELPDAV LVRGIAGGSF EQVTKRLGVL HALRELGVPV YNDARAIERT VDKSMTSLLL HAARIPAPAT WATESAAQAR RIAMREMAAG HALVLKPLFG SQGKNLQLVR EVDGVHHPMP DIDARYAGLA YLQRFVPPMG SPGFDWRVMV VGGRAVTAMR RVSMHWIHNV AQGARCEPAV LEPALAQLAE GAAQALDMDY AGVDLIAAAS GPKIQVLEVN GVAAWQGLQR VTGFNIARAI VDDLLDRKLA QARRLVQQNL PPPERRA
|
| |