| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3059 |
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| Symbol | |
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| ID | 7973779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3215737 |
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| End bp | 3217116 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793643 |
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| Product | histidine kinase |
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| Protein accession | YP_002944944 |
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| Protein GI | 239816034 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3851] Signal transduction histidine kinase, glucose-6-phosphate specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.548972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTGC GCCTGAAGAT CAACCTGATC GTCAGCCTGC TGACGATGCT GTTCGTCGCG
GCCATGCTCG CGCTGCAGAT GCGCGCCATG CGCGAATCGG TGCACGAGGA AGTCGTTGCG
GCCAACCGCG TGGCCGCGCA GCTGCTGAAC CGCACCGCCT GGCTCTACGC GGCCCAGGGC
ACGCCGGCCA TGCTGTCGTT CCTGCAGGGC GTCGGCCGTG TGCGCTCCAA CGACATCACG
CTGCTCGACA CCGAGGAGCG CGTGCTGTAC AGCTCGCCGA CCTCGGTCTA CAAGGCGGGC
CGCGATGCGC CCGACTGGTT CGACCGCCTC GTCTCGCCGC CGCCGTCGCA AATGTCGATT
GCCTTTCCCG GGGGCAAGCT GATGGTGAGT TCCAACGCGT CGCGCGCCGT GCTCGACGCG
TGGGACGACT TCGTGCTGCT GACGCTCAGT GCGCTGGGCC TGCTGGCGAT CGTCAACGCG
GGCGTGTTCT GGCTCGTGGG CCGCGCGACG CGCCCGTTCG CGGACATCGT GCATGCACTG
AACCAGCTCG AGAGCGGGCG CTTCGATGTT TCCCTGCGCG CCCTGCCCGG CACCGAGGCG
GCGGCCATCG GCGCCGCCTT CAACCGCATG GTCGGCATGC TGCAGCAGCA CATCGAGACC
GAGCGGCGCG CCGTGCGCGC CGAGAGCCGC CTGTCCGAAA GCCGCGAGCT GGGCCGCTGG
GTCGACCAGA AGATCGAGCA GGAGCGCCGT CTCATTGCCC GCGAACTGCA CGACGAGCTG
GGCCAGTCGG TCACCGCGAT GCGCAGCATG GCGCTGTCGA TCGCGCAGCG CGTGCAGGCG
CTCGATCCGC AGTCCGAGCA GGCGGCGCGG CTGATCGCAG AGGAATCGGG GCGGCTCTAC
ACGGCCATGC ACGGCATGAT CCCGCGCCTG ACGCCGCTGG TGCTCGACAA GTTCGGCCTG
GTGGCCGCGC TCGAGGACCT GGTCGAGCGA ACCCGCAACA GCCATGGCGG CGTGCAGGTC
GAGTGGCACA TGGAGATCGA ACTCGACCGC CTGCGGCTCG ACACCGACAC CGCGCTGGTG
CTGTACCGCG CCGCGCAGGA AGGCATCACC AACGCGCTGC GCCATGGCGA GGCGCAGCGC
ATCGTGCTGG CCCTGCAGGG CGACGAGCAG ACGGTGAAGC TCACGCTGAC CGACGACGGG
CGCGGCCTGC CCGGCCCTGA TGCCGCCAGG GAAACCAGCA CAGGGCACTA TGGCCTGCGT
TGGCTGGCCG AGCGCATCGA CAGCCTGGGC GGCGACCTGC GCCTTGAACC CGCCGCGCCC
AGCGGCGCCC AATTGACGGT GCGCCTGCCC TTGCCGGCGG CCACCGCGGA GAACACATGA
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| Protein sequence | MTLRLKINLI VSLLTMLFVA AMLALQMRAM RESVHEEVVA ANRVAAQLLN RTAWLYAAQG
TPAMLSFLQG VGRVRSNDIT LLDTEERVLY SSPTSVYKAG RDAPDWFDRL VSPPPSQMSI
AFPGGKLMVS SNASRAVLDA WDDFVLLTLS ALGLLAIVNA GVFWLVGRAT RPFADIVHAL
NQLESGRFDV SLRALPGTEA AAIGAAFNRM VGMLQQHIET ERRAVRAESR LSESRELGRW
VDQKIEQERR LIARELHDEL GQSVTAMRSM ALSIAQRVQA LDPQSEQAAR LIAEESGRLY
TAMHGMIPRL TPLVLDKFGL VAALEDLVER TRNSHGGVQV EWHMEIELDR LRLDTDTALV
LYRAAQEGIT NALRHGEAQR IVLALQGDEQ TVKLTLTDDG RGLPGPDAAR ETSTGHYGLR
WLAERIDSLG GDLRLEPAAP SGAQLTVRLP LPAATAENT
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