| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2972 |
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| Symbol | |
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| ID | 7972248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3130320 |
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| End bp | 3131609 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793557 |
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| Product | O-acetylhomoserine/O-acetylserine sulfhydrylase |
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| Protein accession | YP_002944858 |
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| Protein GI | 239815948 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2873] O-acetylhomoserine sulfhydrylase |
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| TIGRFAM ID | [TIGR01326] OAH/OAS sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.26052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCAGA ACTGGAAATT CGAAACCCTG TCGGTGCACG CTGGCTACTC GCCCGAGCCG
ACCACGCGCG CCGTGGCGCC GCCCATCTAT CAAACGGTGG CCTATGCCTT CGACAGCGCG
CAGCACGGCG CCGACCTGTT CGACCTGAAG GTGCCGGGCA ACATCTACAC CCGCATCAAC
AACCCGACGC AGGACGTGCT CGAACAGCGC GTGGCCGCGC TCGAGGGCGG CATCGCGGCG
CTGGCGCTGG CCTCCGGCCA GGCGGCCGTG ACCTATGCGA TCCAGACCAT TGCCGAGGCG
GGCGACAACA TCGTCAGCAG CACCGCGCTG TACGGCGGAA CCTACAACCT GTTCGCGCAC
ACGCTGCCGC AGTTCGGCAT CACCACGCGC TTCGCGGACC ACCGCGACCC GAGCAGCTTC
GAGAGGCTGT TCGACGAGAA GACCAAGGCG GTGTTCGTCG AATCGCTCGG CAACCCGGCC
GGCAACGTGA CCGACATCGC GGCCATCGCC GAGATCGCGC ACCGCCACGG CGTGCCGCTG
ATCGTGGACA ACACGGTGCC TTCGCCGTAC CTGAGCCGGC CCATCGAACA CGGCGCCGAC
ATCGTGGTGC ATTCGCTCAC CAAGTACCTG GGCGGCCACG GCACCAGCAT CGGCGGCGCC
ATCGTCGATT CGGGCAAGTT CCCGTGGGCC GAACACAAGC AGCGCTTCCG GCGCCTGAAC
GAGCCCGACG TGAGCTACCA CGGCGTGGTC TACACCGAGG CGCTGGGCCC GGCCGCCTAC
ATCGGCCGCG CGCGCGTGGT GCCGCTGCGC AACACGGGCG CGGCGATCTC GCCGTTCAAC
GCCTTCCTGA TCCTGCAGGG CATCGAGACG CTGGCGCTGC GCATGGACCG CATCAGCAGC
AACGCGCTTT CGGTGGCCCA GCACCTGAAG ACGCACAAGG CCGTGAATTG GGTCAACTAC
GCGGCGCTCG AGGACCATCC CGACCACGCA TTGGCAAAGA AGTACTTCGG CGGCCGGTCC
AGCGGCGTGC TGACCTTCGG CATCGGCGCC GGCCGCGAGG GCGGGGCGAA GTTCCTCGAT
GCGCTCAAGC TCTTCACGCG GCTCGTGAAC ATCGGCGACG TGCGCTCGCT CGCCACGCAC
CCGGCCTCCA CCACGCACCG GCAGCTCTCG CCCGAAGAGC TGGCGCGGGC CGGCGTCACG
GAAGACACCG TGCGCCTGTC GGTCGGCATC GAGCACATCG ACGACCTGGT CGCCGACCTC
GACCAGGCGC TGGCTGCCGC GGCCGTGTGA
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| Protein sequence | MSQNWKFETL SVHAGYSPEP TTRAVAPPIY QTVAYAFDSA QHGADLFDLK VPGNIYTRIN
NPTQDVLEQR VAALEGGIAA LALASGQAAV TYAIQTIAEA GDNIVSSTAL YGGTYNLFAH
TLPQFGITTR FADHRDPSSF ERLFDEKTKA VFVESLGNPA GNVTDIAAIA EIAHRHGVPL
IVDNTVPSPY LSRPIEHGAD IVVHSLTKYL GGHGTSIGGA IVDSGKFPWA EHKQRFRRLN
EPDVSYHGVV YTEALGPAAY IGRARVVPLR NTGAAISPFN AFLILQGIET LALRMDRISS
NALSVAQHLK THKAVNWVNY AALEDHPDHA LAKKYFGGRS SGVLTFGIGA GREGGAKFLD
ALKLFTRLVN IGDVRSLATH PASTTHRQLS PEELARAGVT EDTVRLSVGI EHIDDLVADL
DQALAAAAV
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