| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2927 |
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| Symbol | |
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| ID | 7972203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3078633 |
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| End bp | 3079409 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644793512 |
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| Product | ABC transporter related |
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| Protein accession | YP_002944813 |
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| Protein GI | 239815903 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0722568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGC AATATGCACT GGAACTGAAG TCGCTGCGCA AGAATTTCGG CAAGACCGAA
ATCATCCGCG GCGTGGACCT GGCCGTGAAG GCCGGGGAAC GCGTGGCCAT CATCGGCCCG
AACGGGGCAG GAAAGTCGAC GCTGTTCAAC CTGATCAGCG GGCGGCTTGC ACCCACCAGC
GGCGAAGTGC TGCTGAACGG CCAGCGCATC GACGGCAAGA AGCCCTACGA GATCAACCGG
CTGGGCCTGT CGCGCAGCTT CCAGATCACC AACATCTTCC CGAAGCTCAG CGTGTTCGAG
AACCTGCGCT GCGGCGTGCT GTGGAGCCTG GGCTACCGCT ACACCTTCCT GCGCTTTCTC
TCGAACCTGG ACGACGCCAA CGCGCGCACC GAAGAGCTCA TCAAGCAGAT CGGCCTGCAG
CGCAAGCGCG ACGTGCATGC GGTGAACCTC ACCTATGCGG AGCAGCGCGC GCTCGAGATC
GGCGTGACCA TTGCGGGCGG CGCCGGTGTG ATTCTTCTGG ACGAGCCCAC GGCCGGCATG
AGCAAGACCG AGACGGCGCA CTTCATCTCG CTCATCAAGC ACGTGACGGT CGGCAAGACG
CTGCTGACGG TGGAGCACGA CATGGGCGTG GTCTTCGGGC TGGCCGACAA GATTGCAGTG
GTGGTGTATG GCGAGGTCAT CGCCTTCGAC ACGCCGGCTG CCGTTCGCGC CAATGCGCGG
GTTCAGGAGG CGTATCTGGG GTCTTCGGTT GCCGATGCGC AGGGGGCGGG GCATTGA
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| Protein sequence | MSAQYALELK SLRKNFGKTE IIRGVDLAVK AGERVAIIGP NGAGKSTLFN LISGRLAPTS
GEVLLNGQRI DGKKPYEINR LGLSRSFQIT NIFPKLSVFE NLRCGVLWSL GYRYTFLRFL
SNLDDANART EELIKQIGLQ RKRDVHAVNL TYAEQRALEI GVTIAGGAGV ILLDEPTAGM
SKTETAHFIS LIKHVTVGKT LLTVEHDMGV VFGLADKIAV VVYGEVIAFD TPAAVRANAR
VQEAYLGSSV ADAQGAGH
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