| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2924 |
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| Symbol | |
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| ID | 7972200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3073928 |
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| End bp | 3075403 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793509 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944810 |
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| Protein GI | 239815900 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAC GCATCTTTCT CGGGCTGCTG CTGGTGCTTC TGGCACTGGT GGCGGCCGTG
GCGGTCAAGA CCTGGACCAC GCCATCGCAG CAGCTGGCGG TGGCGCCCGC ACCCAAGCTG
GACATCGACC TGCAGGCGGC CGCGAAGCGG CTGTCCACCG CCATCACGTT CCGCACGGTG
TCGGCCCTGG ACGACCCGGC CGCGAACCTG GCCGAGTTCG ACAAGCTGCA TGCCTACCTC
GCGCAGCAGT TCCCCAAGCT CCACGCCACC CTCAAGAAGG AAGTGGTCGG CAACAGGGCG
CTGCTCTACA CATGGGCCGG CAGCGATCCG CAGGCCAAGC CCATTGCGCT CATGGCGCAC
CAGGACATGG TGCCCATTGC CCCGGGTACC GAGAAGGCCT GGACGGTCGA CCCCTTCGCG
GGCGAGATCA GGGACGGCTT CGTCTGGGGC CGCGGCACGC TCGACAACAA GAGCAACCTG
TTCGCGCAGA TGGAAGCCAT CGAGCTGCTG GTTGCGAGCG GCTTCCAGCC GAGGCAGACC
GTCTACCTCG TGATGGGCGA CGACGAGGAG GTGAGCGGCC TGCGCGGCGC GCAGCCCATT
GCCGAACTGC TCAAGTCGCG CAACGTGCGG CTCGATTGGG TGCTCGACGA GGGCCTGCTG
GTCCTCGACG GCGTGCTGCC GGGTCTTTCC AAGCCCGCGG CGCTCATTGG CCTGGCGGAG
AAGGGCTACG GGACCTTCTT TCTCTCGCTC GACACTGCGC CCGGCCATTC GTCGATGCCG
CCGCAGCACA GCGCCATCGG CAGCATGAGT GCGGCGCTCG CGCGGCTCGA GGCCCACCCG
ATGCCCGGCG GCATCAAGGG CGTGGCCGCG CAGATGTTCG GCGCGCTCGC GCCCGAGATG
AGCGGCGTGA ACCGCGTCAT GCTCTCCAAC CTGTGGCTCA CCGAACCGCT GGTGCGCGGC
CAGCTCGAAA AGAGCCCGAG CAGCAACGCG ATGCTGCGCA CGACCACGGC GCTGACCATC
GTGCGTGCCG GCAACAAGGA CAACGTGCTG CCCGGCCGCG CCGAAGCGGC GGTCAACTTC
CGCATCCTGC CGGGCGACAG CATCGACAGC GTGGAAGCGC ACCTGCGCAA GAGCCTGGGC
AACGACGAGA TCAAGATCAA GCGCTATCCC GGCAACTCGG AGCCGTCGCC CGTGTCGCCG
ACCGACAGCA CCGGCTACCG CGCGATCCAG CAGGCGGTGC GCCAGTCGTT CCCCGATGTG
GTGGTGGCGC CCGGCCTCAT GACGGCCGCC ACCGATTCGC GCCACTTCAG CCTCGTGAGC
GACGCGGTCT TCCGCTTCTC GCCGCTGCGC ATGAAGGGCG AGGACCTTGC GCGCTTCCAT
GGCAACAACG AGCGCGTCTC CATCGCCAAC TACGGCGAGA TGATCGGCTT CTATCACCAG
CTCCTGCGCA ACGGCAACGC CGCGCCGGCG CAATGA
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| Protein sequence | MLKRIFLGLL LVLLALVAAV AVKTWTTPSQ QLAVAPAPKL DIDLQAAAKR LSTAITFRTV
SALDDPAANL AEFDKLHAYL AQQFPKLHAT LKKEVVGNRA LLYTWAGSDP QAKPIALMAH
QDMVPIAPGT EKAWTVDPFA GEIRDGFVWG RGTLDNKSNL FAQMEAIELL VASGFQPRQT
VYLVMGDDEE VSGLRGAQPI AELLKSRNVR LDWVLDEGLL VLDGVLPGLS KPAALIGLAE
KGYGTFFLSL DTAPGHSSMP PQHSAIGSMS AALARLEAHP MPGGIKGVAA QMFGALAPEM
SGVNRVMLSN LWLTEPLVRG QLEKSPSSNA MLRTTTALTI VRAGNKDNVL PGRAEAAVNF
RILPGDSIDS VEAHLRKSLG NDEIKIKRYP GNSEPSPVSP TDSTGYRAIQ QAVRQSFPDV
VVAPGLMTAA TDSRHFSLVS DAVFRFSPLR MKGEDLARFH GNNERVSIAN YGEMIGFYHQ
LLRNGNAAPA Q
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