Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2914 |
Symbol | |
ID | 7972190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3063800 |
End bp | 3064705 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644793499 |
Product | hypothetical protein |
Protein accession | YP_002944800 |
Protein GI | 239815890 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.445134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCAGG ACTTCAAGGG CAAGACGGCC GTACTCACCG GCGCGGGTTC GGGCTTCGGC CTCGAGTGCG CGCGCATCGG GGCTGCGCGC GGCATGAACC TCGTGCTGGT CGACGTGCAG CAGGACGCGC TCGACAAGGC CCGCGCCGAG ATGGAAGCCG CCGGCGCGCA GGTGCTGGCG CGCAAGGTCG ACGTGTCGGA CGCCGCGCAG ATGGAAGCCC TGGCCCTTGC GGTGAAGGAG CGCTTCGGTG CGCCGCACTT CGTGTTCAAC AACGCCGGCG TGGGCGCGGG CGGCCTGGTG TGGGAGAACA CCGTGGCCGA CTGGGAGTGG GTGCTGGGCG TGGACCTGTG GGGCGTGATC CACGGCGTGC GCCTGTTCAC GCCGATGATG CTCGAGGCCG CCGCCAAGGA CCCGGCCTAC CGCGGCCACA TCACCAACAC GGCCAGCATG GCCGGTCTGC TCACGCCGCC CAACATGGGC ATCTACAACG CAGCGAAGGC CGCGGTGGTG AGCCTCACCG AGACGCTGTA CCAGGACCTG ACGCTGGTCA CCGACCAGAT CGGCGCGAGC CTCCTGTGCC CGTACTTCGT GCCGACCGGC ATCACGAGCA GCGAGCGCAA CCGCCCGAAC GCGCCCAAGG AAACCGAGCT CACCAAGAGC CAGCTGATCG GCCAGGCCAT GAGCAACAAG GCGGTGAGCA GCGGCAAGAT CACGGCGGCC GAAGTGGCGG CGAAGGTGTT CGACGCGATC AGCGACAACC AGTTCTATGT GTTCAGCCAC CCGAAGGCGC TGGGCAACGT GAGGAGCCGC ATGGAGAACA TCGTGGCGGT CAAGAACCCG GCCGACCCGT TCCTCGAGCG GCCGGAGATC GGGCAGAAGT TGCGGGAGCA GCTGCGGGCG GGGTGA
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Protein sequence | MIQDFKGKTA VLTGAGSGFG LECARIGAAR GMNLVLVDVQ QDALDKARAE MEAAGAQVLA RKVDVSDAAQ MEALALAVKE RFGAPHFVFN NAGVGAGGLV WENTVADWEW VLGVDLWGVI HGVRLFTPMM LEAAAKDPAY RGHITNTASM AGLLTPPNMG IYNAAKAAVV SLTETLYQDL TLVTDQIGAS LLCPYFVPTG ITSSERNRPN APKETELTKS QLIGQAMSNK AVSSGKITAA EVAAKVFDAI SDNQFYVFSH PKALGNVRSR MENIVAVKNP ADPFLERPEI GQKLREQLRA G
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