Gene Vapar_2914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2914 
Symbol 
ID7972190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3063800 
End bp3064705 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content68% 
IMG OID644793499 
Producthypothetical protein 
Protein accessionYP_002944800 
Protein GI239815890 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.445134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCAGG ACTTCAAGGG CAAGACGGCC GTACTCACCG GCGCGGGTTC GGGCTTCGGC 
CTCGAGTGCG CGCGCATCGG GGCTGCGCGC GGCATGAACC TCGTGCTGGT CGACGTGCAG
CAGGACGCGC TCGACAAGGC CCGCGCCGAG ATGGAAGCCG CCGGCGCGCA GGTGCTGGCG
CGCAAGGTCG ACGTGTCGGA CGCCGCGCAG ATGGAAGCCC TGGCCCTTGC GGTGAAGGAG
CGCTTCGGTG CGCCGCACTT CGTGTTCAAC AACGCCGGCG TGGGCGCGGG CGGCCTGGTG
TGGGAGAACA CCGTGGCCGA CTGGGAGTGG GTGCTGGGCG TGGACCTGTG GGGCGTGATC
CACGGCGTGC GCCTGTTCAC GCCGATGATG CTCGAGGCCG CCGCCAAGGA CCCGGCCTAC
CGCGGCCACA TCACCAACAC GGCCAGCATG GCCGGTCTGC TCACGCCGCC CAACATGGGC
ATCTACAACG CAGCGAAGGC CGCGGTGGTG AGCCTCACCG AGACGCTGTA CCAGGACCTG
ACGCTGGTCA CCGACCAGAT CGGCGCGAGC CTCCTGTGCC CGTACTTCGT GCCGACCGGC
ATCACGAGCA GCGAGCGCAA CCGCCCGAAC GCGCCCAAGG AAACCGAGCT CACCAAGAGC
CAGCTGATCG GCCAGGCCAT GAGCAACAAG GCGGTGAGCA GCGGCAAGAT CACGGCGGCC
GAAGTGGCGG CGAAGGTGTT CGACGCGATC AGCGACAACC AGTTCTATGT GTTCAGCCAC
CCGAAGGCGC TGGGCAACGT GAGGAGCCGC ATGGAGAACA TCGTGGCGGT CAAGAACCCG
GCCGACCCGT TCCTCGAGCG GCCGGAGATC GGGCAGAAGT TGCGGGAGCA GCTGCGGGCG
GGGTGA
 
Protein sequence
MIQDFKGKTA VLTGAGSGFG LECARIGAAR GMNLVLVDVQ QDALDKARAE MEAAGAQVLA 
RKVDVSDAAQ MEALALAVKE RFGAPHFVFN NAGVGAGGLV WENTVADWEW VLGVDLWGVI
HGVRLFTPMM LEAAAKDPAY RGHITNTASM AGLLTPPNMG IYNAAKAAVV SLTETLYQDL
TLVTDQIGAS LLCPYFVPTG ITSSERNRPN APKETELTKS QLIGQAMSNK AVSSGKITAA
EVAAKVFDAI SDNQFYVFSH PKALGNVRSR MENIVAVKNP ADPFLERPEI GQKLREQLRA
G