Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2910 |
Symbol | |
ID | 7970799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3059509 |
End bp | 3060702 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644793495 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002944796 |
Protein GI | 239815886 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.333909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAATCG CTCTACTCGC CCTTACCGCC GGTGCCTTCG GAATAGGCAC CACCGAATTC GTCATCATGG GCCTGCTGAT GCAGGTCTCA GCGGATCTGC ACGTCTCCAT CACGGCCGCC GGCCTGCTGA TCTCGGGCTA TGCGCTCGGG GTGGCCGTGG GCGCGCCGAT CCTGACCATC GCCACCCGCA AGCTGCCGCG CAAGACCGTG CTGCTCGCGC TGATGGCGAT CTTCACGCTC GGCAACCTGG CCTGTGCGCT CGCGCCCAGC TACGAGCTGC TGATGGCCGC GCGCGTGGTC ACCTCGCTCG CGCACGGCAC CTTCTTCGGC GTCGGCTCGG TGGTGGCCAC CGGACTCGTG GCGCCGGAAC GGCGCGCCTC GGCCATCGCC ATCATGTTCA CCGGCCTCAC GGCCGCCACG CTGCTGGGCG TGCCGGCCGG TGCCTGGCTC GGGCTGCAGT ACGGCTGGCG CGCCACCTTC TGGGCGGTGA CGCTGATCGG CGTGCTGGCC TTTGCGGTGC TTGCTGTGTT CGTGCCCCGC GTCAAGGGCG AAGCCAAGAC GGCGCCGCTG CGCGAGGAGC TCGCGGTGCT GGCGCGGCCG CAGGTGCTGC TCGGCCTGGC GATGACGGTG CTGGGCTACG CGGGCGTGTT CGTGGTGTTC ACCTACATCC AGCCCTTGCT GACGCAGGTC ACGGGCCTGT CCGAATCGGC GGTGTCGCCG ATCCTGCTGG TGTTCGGCGG CGGCCTGGCC GTGGGCAACA TCCTCGGCGG CAGGCTGGCC GACAGGTCGA CCATGCCGGC CGTGCTCGGC ACGCTGATGG CGCTGGCCGC GGTGCTCGGT GCGATGCAGT TCACCATCGG AACGCCGTTC GCAGCGGTGG TGTTCGTGGG CCTGCTCGGC ATCGCTTCGT TTGCCACCGT GGCGCCGATG CAGCTGCGCG TGCTCGAGAA GGCCTCGGGC GCGGGCCAGA ACCTGGCGTC GAGCCTCAAC ATCGCGGCCT TCAACCTGGG CAATGCGCTC GGCGCCTGGG TGGGCGGCGT GGTCATCGAC CATGGCCCGG GCCTGCGCGC GCTCGGCTGG GTGGCCGCGC TGCTCACGCT CGCCGGGCTG GCGATCGCGC TCTGGAGCCG TGCGCTCGAC CGGCGCGAAG GCGGCAATGC CGGGGCGGCC GATTGCGCGT CGGCCCGGGC CTGA
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Protein sequence | MPIALLALTA GAFGIGTTEF VIMGLLMQVS ADLHVSITAA GLLISGYALG VAVGAPILTI ATRKLPRKTV LLALMAIFTL GNLACALAPS YELLMAARVV TSLAHGTFFG VGSVVATGLV APERRASAIA IMFTGLTAAT LLGVPAGAWL GLQYGWRATF WAVTLIGVLA FAVLAVFVPR VKGEAKTAPL REELAVLARP QVLLGLAMTV LGYAGVFVVF TYIQPLLTQV TGLSESAVSP ILLVFGGGLA VGNILGGRLA DRSTMPAVLG TLMALAAVLG AMQFTIGTPF AAVVFVGLLG IASFATVAPM QLRVLEKASG AGQNLASSLN IAAFNLGNAL GAWVGGVVID HGPGLRALGW VAALLTLAGL AIALWSRALD RREGGNAGAA DCASARA
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