| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2884 |
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| Symbol | |
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| ID | 7970773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3030893 |
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| End bp | 3032410 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793469 |
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| Product | Mannitol dehydrogenase domain protein |
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| Protein accession | YP_002944770 |
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| Protein GI | 239815860 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.136166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGGC TGAATGCCGA GATGCTGGCC GCGCTGCCGC CCGCGGTGGC GCGACCCGCC
TACGACCGCG CAGCACTCGA GGCCGGCATC GTCCACCTGG GTGTGGGCGC ATTCCAGCGC
GGTCACCTGG CCGCCGTCAA CGAAGCCGCA CTGCATGCGA GCGGCGACCT GCGCTGGGGC
ATTGCGGGTG TGTCGCTGCG CAGCCCCGAC ACGCGCGATG CGCTCGCGCC GCAGGACGGC
CTCTACACGC TCACGCTGCG CGACGTGGAC GAGGCCGGCA CGCCGCGCGC GTCGCTGCAG
GTCCTCGGCT GCCTGCTCGG CGTGCAGGTC GCGCCCGAAG ACCCGGCGGC GGTGCTCGCG
CGCATCGCGC ATCCCGCGAC CCGCATCGTG AGCCTCACCG TCACTGAAAA AGGCTACTGC
CACGATCCGG CCACCGGTGC GCTGCGCGCC GACCATCCCG ACGTGCTGCA CGACCTCGCG
CGCCCCGATG CGCCGCGCGG CACGCTCGGC TTCGTGGTCT CGGGCCTGCG CCTGCGGCAG
CTGCGCGGGC TCGCACCGGT CACGCTGCTG TCGCTCGACA ACCTGCCTTC CAACGGCCAT
TTGCTGCGCG GCCTGGTATT GGACTTCGCG CAGCGCGTCG ATCCGCAGCT GGCACGCTGG
ATCGCCGAGC ACTGCAGCTT TCCCTGCTCG ATGGTGGACC GCATCGTGCC GCGCACCACC
GACGCCGACC GCGCGCAGGT CGACGCCGCG CTCGGGCTGG AGGACGCCTG GCCGGTGGTC
GGCGAACGTT TTCTCGAATG GGTGGTGGAA GACGATTTCG CGGCCGGCCG CCCGGCCTGG
GATGCCGGCG GCGCCCGCTT CGTGCCCGAC GCGCGCCCCT TCGAGACGCT CAAGCTGCGC
ATGGTCAACG GCGCGCATTC GGCGCTTGCG TACCTGGGCG CGATGGCAGG GCTCGACACC
GTGGACCGCG CCGTCGCCAC GCCGGCCCTG CACCGCTACC TCGACCGCCT GATGCGCGAG
GAGATTGCGC CCACGCTGCC GGCGCTGCCC GGCCTCGACC TCGATGCCTA CCGCCAGCGC
CTGCTCGAGC GCTTCGCCAA CCCGGCGCTC GCGCACCGCA CCGCGCAGAT CGCGATGGAC
GGTTCGCAGA AGCTGCCGCA GCGCCTCCTG GGCACGGTGC GCGAGCGGCT CGCCGCAGGC
GCTTCGATCG ACCGCCTTGC ACTCGCCGTC GCGGCCTGGC TGCACTACCT GCGCGGCATC
GACGAACTGG GCCGCCGCCA CGAGATCCAG GACCCGTTGG CCGATGCGCT GGCCGAACGC
TGCGCGGCAG CCGAACGCGC GGCGGCTGCG GCCGAGCCGG CGCAGGCCGA CGAAGCGCGC
GTGGCCGTGT TCGCGGCTTT CGCGCCGGTG TTCGGCAACG ACCTGGGGAG CAACCCGCGC
TTCGTCTCGG CCGTGGCCAC GCAGCTGCGT GCGTTGCGCG AACTCGGCGT GCACAAGACA
CTGGCCGACC AGCCCTGA
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| Protein sequence | MTRLNAEMLA ALPPAVARPA YDRAALEAGI VHLGVGAFQR GHLAAVNEAA LHASGDLRWG
IAGVSLRSPD TRDALAPQDG LYTLTLRDVD EAGTPRASLQ VLGCLLGVQV APEDPAAVLA
RIAHPATRIV SLTVTEKGYC HDPATGALRA DHPDVLHDLA RPDAPRGTLG FVVSGLRLRQ
LRGLAPVTLL SLDNLPSNGH LLRGLVLDFA QRVDPQLARW IAEHCSFPCS MVDRIVPRTT
DADRAQVDAA LGLEDAWPVV GERFLEWVVE DDFAAGRPAW DAGGARFVPD ARPFETLKLR
MVNGAHSALA YLGAMAGLDT VDRAVATPAL HRYLDRLMRE EIAPTLPALP GLDLDAYRQR
LLERFANPAL AHRTAQIAMD GSQKLPQRLL GTVRERLAAG ASIDRLALAV AAWLHYLRGI
DELGRRHEIQ DPLADALAER CAAAERAAAA AEPAQADEAR VAVFAAFAPV FGNDLGSNPR
FVSAVATQLR ALRELGVHKT LADQP
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