| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2876 |
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| Symbol | |
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| ID | 7970765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3023878 |
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| End bp | 3024615 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793461 |
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| Product | GntR domain protein |
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| Protein accession | YP_002944762 |
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| Protein GI | 239815852 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCTCA AGCTCATTCA CCCATCCTCC GAAGCGATGT CGAAAATCGG CCAACCTCCA
ATGGAGAAGC CGTACCAGCG CCTGGCTGCC AATATCCATG AATTGGTCAA ACAGGGTGAG
TTTCTGGTCG GCCAGCGGCT GCCCTCCGAA CGGGCGCTGG CGGAGCGCTT CGACGTGAGC
CGCACCTCGG TGCGCGAGGC CATCATTGCG CTGGAGCTGC AGGGCGTGGT CGAGGTGCGC
GGCGGATCCG GCATCTACAT CTGCCAGCCG CAGGACGCGC CCACGCGGCT GCCGGTGGTG
CAGGAAACCG GTGCCGGCCC CTTCGAGCTG CTGCGCGCGC GCTGCCTGAT CGAGTCCGAG
ATCGCCTCGC TGGCGGCCAC CACGCGCAAG GACGCCGACC TCGACAAGAT GTTCGGCGCG
CTCGCCACCA TGCGCGAGCA GATGCACGAC AAGGAAGCCA ACGAGGCGGC CGACCGCATG
TACCACCTGC ACATTGCCGA ATCCACCGGC AACAGCGTGC TGCTGCAGAC GGTGACGAAT
CTCTGGGACC AGGCCAAGGG CCCGATCTGG ACGCAGATCG AGCAGCACTT CCATTCGCCC
GCACTGCGCC TCCAGTCGCA AGACGACCAC CAGCGCATCT TTGCCGCGAT CGTCTCGGGC
GATGCCGAGG CCGCGCGGCT GGCCATGCGG GCGCACCTGG AACGCGTGAT CGGCGAGTTC
GCCCAGAGCT GGCGCTAG
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| Protein sequence | MALKLIHPSS EAMSKIGQPP MEKPYQRLAA NIHELVKQGE FLVGQRLPSE RALAERFDVS
RTSVREAIIA LELQGVVEVR GGSGIYICQP QDAPTRLPVV QETGAGPFEL LRARCLIESE
IASLAATTRK DADLDKMFGA LATMREQMHD KEANEAADRM YHLHIAESTG NSVLLQTVTN
LWDQAKGPIW TQIEQHFHSP ALRLQSQDDH QRIFAAIVSG DAEAARLAMR AHLERVIGEF
AQSWR
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