| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2851 |
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| Symbol | |
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| ID | 7970740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2998673 |
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| End bp | 2999095 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793436 |
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| Product | protein of unknown function UPF0047 |
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| Protein accession | YP_002944737 |
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| Protein GI | 239815827 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0432] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTCAGGC AGACAACCAC CACACTCGAC TTCGACACCG ATGGCCGGGG CCTTCTGGAA
ATCACGGAGG CCGTGGCGCA ATGGGTCGCG AGCACCGGCT TTCAGACCGG GCTGCTGACG
CTCTTCATCC GCCATACCTC GGCCAGCCTG CTGGTGCAGG AGAACGCGGA TCCTGAAGTG
CAGGCGGATC TCGACCGTTT TCTTGCGCGC CTGGTGCCCG ATGGCGACGC GCTTTTCCGG
CATCGCGACG AAGGGCCGGA CGACATGCCG GCCCATGTGC GTTCGGCGCT GACCGCGGTG
CAGCTGTCGG TTCCGGTGAC GAACGGCCGC ATGGCGCTGG GCACCTGGCA GGGCATCTAC
CTGTGGGAGC ACCGGCTGAA GCCGCACCGG AGGCAGGTGG CCCTGCACCT GATCGGGTCC
TAG
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| Protein sequence | MLRQTTTTLD FDTDGRGLLE ITEAVAQWVA STGFQTGLLT LFIRHTSASL LVQENADPEV
QADLDRFLAR LVPDGDALFR HRDEGPDDMP AHVRSALTAV QLSVPVTNGR MALGTWQGIY
LWEHRLKPHR RQVALHLIGS
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