| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2832 |
|---|
| Symbol | |
|---|
| ID | 7971045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 2976558 |
|---|
| End bp | 2977955 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644793417 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002944718 |
|---|
| Protein GI | 239815808 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.907997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGATGA AGAACCACCA CTTCCGATGG ATGCGCGGCA TCCTCTTTGC CGGAGCCATG
GCCTTGCTGC TCTCGTGCGG CGGTGGCGGC GGCGGCGGAG GTTCGGCAGG CAGCCTGGCC
GGCATTGCCG GGAGCGGCGC GACGGGTTCT GGAAGCGATG GCGCGGGCAC GGGAGGTGGC
GGGACCGATG GCACCAGCGG TACAGGTGGC ACGGGCGACA CGGGCGGCAC AGGCACCGCA
GGCGGCTCCG ACGGCACGAG CACCGCCGGC AACGGCAGCG GCGACGGTTC GGGCGTGGGC
TCGGGCGGCA CCGGCGTGAG CACCGCCGAC GCCACCGGCA TCGGCTCCGT CGGCGGGCTG
GGCAGCATCA TCCTGAACGG CGTGCGCTAC AACACGGATA CCGCCAGCAC CAACCTGGAG
GACGCCACCG AACTGCAGAT CGGCATGAGC GTGCGCATTG CCGGCAAGAT CGACAGCGAC
TTCACCGCGG CCACGGCGCA GCAGGTCGAT TCGGCTGCCG AGCTGCGCGG TGCCGTCTCG
GCCATCGATG CCGTCGGCGG CAGCTTCGCC GTGATGGGCA CCACGGTCAC CATCGACAAC
GCCACGGTCT GGAGCGGCGC GAACAGCCTG GCTGGGCTCA CGATCGGCGG CGTGGTGCAG
GTCTGGGGCC TGCCCTCGGC GCCGGGCAGC TTGCGTGCCA CGCGGGTTGA ACTCAAGCCG
GCTTCGGCTG AGCCGCTGGT GACCGGCGCG GTGCAAAACC TGGACCGGCT TGCCCAGCAA
TTCACGCTGG GCCAGCTCAC GGTGCGCTAC GGCAGCGCCA CATTCTCGGG CGGCATCGAC
GCCTCCACGC TGGCCGAGGG CGCCATCGTC CGCGTGCGCG GCAGCGCTGC GCCGGTGCTG
GGCACTTTCG CTGCAAGCAA GGTGCAGGGC TGGTACGCGG TGCCAACGCA GAACGCCGCC
GCGGTGCAGC TGGCGGGTGT CATCACGAAC TACGGCGGGC TCAATGCCTT CAAGGTGCTG
GGCACGGCCG TCGATGCCTC CCATGCCATC GTCACGGGTG GCCCGGTGGG TTCGATTGGC
AACGGCGTCA AGGTGGAACT CGACGGCTTC ATGAGCAACG GCGTGCTGGT GGTGAAGAAG
CTGCGAATTC GCTATGTCCC AGGAACGGGC GGGCCGGTCG CGTTCACCGT CATCGGCCCT
GTTACCAACT ATCAATCCGC TTCCGACTTC AAGGTGAAAG GACAGCGTGT GAATGCCGGC
GGCTCCGCAA CGGTATTCGA AAACGGCACG GTCGCCGATC TCGCCAATCT GCCCCCCAAT
CGCCAAGTCT CTGTGGTGGG CGACACGGTG GTCGACGGCG TGCTCATCGC GAACCGCGTC
ACATTCCTGA CGCCCTGA
|
|---|
| Protein sequence | MMMKNHHFRW MRGILFAGAM ALLLSCGGGG GGGGSAGSLA GIAGSGATGS GSDGAGTGGG
GTDGTSGTGG TGDTGGTGTA GGSDGTSTAG NGSGDGSGVG SGGTGVSTAD ATGIGSVGGL
GSIILNGVRY NTDTASTNLE DATELQIGMS VRIAGKIDSD FTAATAQQVD SAAELRGAVS
AIDAVGGSFA VMGTTVTIDN ATVWSGANSL AGLTIGGVVQ VWGLPSAPGS LRATRVELKP
ASAEPLVTGA VQNLDRLAQQ FTLGQLTVRY GSATFSGGID ASTLAEGAIV RVRGSAAPVL
GTFAASKVQG WYAVPTQNAA AVQLAGVITN YGGLNAFKVL GTAVDASHAI VTGGPVGSIG
NGVKVELDGF MSNGVLVVKK LRIRYVPGTG GPVAFTVIGP VTNYQSASDF KVKGQRVNAG
GSATVFENGT VADLANLPPN RQVSVVGDTV VDGVLIANRV TFLTP
|
|---|
| |