Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2824 |
Symbol | |
ID | 7971037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2969136 |
End bp | 2970548 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644793409 |
Product | oxygen-independent coproporphyrinogen III oxidase |
Protein accession | YP_002944710 |
Protein GI | 239815800 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0116483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAGC CTTGCACCGC CTCCACGGGG CTTCCAGATG CCGCCCCCTT GTCGGCTGCC GTGCTGCGGC AGTTCGACGT TGCGGGCCCG CGCTACACCT CGTATCCGAC GGCCGACCGG TTCATCGAAG CCTTCGGTGC GGACGAGTAC GCGGCGGCGC TGCGCGAGCG GCGCGATGCG GGCGCTTCGG CGGCGCCGCT GTCGCTCTAC GTGCACATTC CGTTCTGCGA ATCGCTGTGC TACTACTGCG CATGCAACAA GGTGGTGACG CGGCACCACG AGCGGGCCAC CCAGTACCTG GCCTACCTGG CGCGCGAGAC CCGGCTGCAG GCCGCGCAGC TGGGCCGCCG CGCCGCCGTG AGCCAGTTGC ACCTGGGCGG CGGCACGCCC ACCTTCCTGA GCGACGCGGA GCTGGGCGAA CTGCTGGCCA TGCTGCGCGA ATCCTTCGAC TTCGTCCCCG GCGGCGAATG GTCCATCGAG ATCGATCCGC GCACCGTCGA TGCCGCGCGG CTCGCCAGCC TGGCGACGCT GGGTTTCAAC CGGCTGAGCT TCGGCGTGCA GGACTTCGAC CCCGAGGTGC AGAAGGCCGT GCACCGCATC CAGCCCGCGC ACCAGGTGTT CGGCTTGATG GCCGATGCGC GCGCGCTGGG ATTCAAGTCG ATCAACGCCG ACCTGATCTA CGGGCTGCCG CGCCAGAACG ACAGGTCCTT CGAGCGCACC ATGGCCCAGG TCTGCGAGCT TCGGCCCGAC CGCATCGCGC TCTACGCCTA TGCGCACCTG CCCGAACGCT TCAAGCCGCA GCGGCGCATT GCCGCGGACG AACTGCCCGA CGCCGCCGCG CGGGTGCGAA TGCTCTCGCG CGCCATTGCC ACGCTCAGCG ATGCCGGCTA CGTCTACATC GGCATGGACC ACTTCGCGCT GCCGGACGAT CCGCTGGCGG TGGCCAAGCG GCAGGGGCGG CTGCAGCGCG ATTTCCAGGG CTACAGCACG CAGCCGGAGG GCGACCTGGT GGCGCTCGGC GTTTCCGCCA TCGGCCGCAT CGGCGCCAGC TACAGCCAGA ACGCCAAGAC GCTGGACACC TACTACGACC TGCTCGGCCA GGGCCGCCTG CCCGTGGTCC GCGGCCTTGC GCTGTCGCGC GACGACGTGC TGCGGCGCGC GGTCATCATG GCGGTGATGT GCAGGGGGCG GGTGGTGTTC GACGCCATCG GCGAGGCGCA CCGCATCGAC TTCCGGCACT ACTTCGCGGC CGAGTTCGCG GCGCTCGGGC CGCTTGTGGC CCAGGGACTG GTGCGGGTCA GCGACCACGA CATCGAGGTC ACGGCCGAGG GCTGGTTCGT GGTGCGCGCC ATCGCCATGG TGTTCGACCG CTATTGCCGC GAGAACCGCA CGCGCTTTTC GCGCGTGGTC TGA
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Protein sequence | MTQPCTASTG LPDAAPLSAA VLRQFDVAGP RYTSYPTADR FIEAFGADEY AAALRERRDA GASAAPLSLY VHIPFCESLC YYCACNKVVT RHHERATQYL AYLARETRLQ AAQLGRRAAV SQLHLGGGTP TFLSDAELGE LLAMLRESFD FVPGGEWSIE IDPRTVDAAR LASLATLGFN RLSFGVQDFD PEVQKAVHRI QPAHQVFGLM ADARALGFKS INADLIYGLP RQNDRSFERT MAQVCELRPD RIALYAYAHL PERFKPQRRI AADELPDAAA RVRMLSRAIA TLSDAGYVYI GMDHFALPDD PLAVAKRQGR LQRDFQGYST QPEGDLVALG VSAIGRIGAS YSQNAKTLDT YYDLLGQGRL PVVRGLALSR DDVLRRAVIM AVMCRGRVVF DAIGEAHRID FRHYFAAEFA ALGPLVAQGL VRVSDHDIEV TAEGWFVVRA IAMVFDRYCR ENRTRFSRVV
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