| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2818 |
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| Symbol | |
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| ID | 7971031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2964188 |
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| End bp | 2965627 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793403 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_002944704 |
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| Protein GI | 239815794 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.170885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAAC CCCATCCTCC CGCAGCGGTC TACGACGACA CCGCCGTACG GCAGCTCGCC
CTCATGTCCG TGGTCTGGGG CGTGGTCGGC ATGCTGGTCG GCGTGATCAT CGCCACCGAG
CTCGCCTGGC CCGAATTCAG CCTCGGCATC CCGTGGCTCA GCTACGGCCG GCTACGGCCG
CTGCACACCA ACGCGGTCAT CTTCGCGTTC GGCGGCTGCG CGCTCATGGC CACCAGCTTC
CACGTGGTGC AGCGCACCTG CCAGGTCCGG CTGTTCGCGC CGGCGCTCGC GTCGTTCGTG
GTCTGGGGCT GGCAGGCGGT GATCGTGGCC GCCGCCATCA GCCTGCCGCT GGGCTACACC
ACGGGCAAGG AATACGCCGA GCTGGAATGG CCGATCGACA TCCTGATCGC GGTGGTGTGG
GTGGCCTATG CGGTGGTGTT CTTCGGCACC ATCGGCATGC GCCGCGTGCG CCACATCTAC
GTGGCCAACT GGTTCTACGG CGCCTTCATC ATCGCGGTGG CGCTGCTGCA CATCGTCAAC
AGCGCCGAGA TTCCGGCGGG CTGGATGAAG AGCTACTCGG CCTATGCCGG CGTGCAGGAC
GCGATGGTGC AGTGGTGGTA CGGCCACAAC GCGGTGGGCT TCTTCCTCAC CGCGGGCTTC
CTCGGGATGA TGTACTACTA CATTCCCAAG CAGGCCGGCC GGCCGGTGTA TTCGTACCGG
CTCTCCATCG TCCACTTCTG GGCGCTGATC TTCACCTACA TGTGGGCCGG CCCGCACCAC
CTGCACTACA CGGCGCTGCC GGACTGGACG CAGTCGCTGG GCATGGTGTT CTCGCTGATC
CTGCTCGCGC CGAGCTGGGG CGGCATGATC AACGGCGTGA TGACGCTCTC GGGCGCCTGG
CACAAGCTGC GCACCGACCC GATCCTGCGC TTCCTGATCG TGGCGCTGTC GTTCTACGGC
ATGTCGACCT TCGAGGGTCC GATGATGTCG ATCAAGACCG TCAACGCCCT GAGCCACTAC
ACCGACTGGA CCATCGGCCA CGTGCACTCC GGCGCGCTGG GCTGGGTGGG CTTCATCACG
ATGGGCTCGC TGTACTACCT GATCCCGCGC ATGTACGGCC GCACCGCCAT GTTCAGCGTG
AAGGCCATCG AGGCGCATTT CTGGATGGCC ACCATCGGCA TCGTGCTGTA CATCGCCGCC
ATGTGGATCG CCGGCGTGAT GCAGGGCCTG ATGTGGCGCG CCATCAATCC CGACGGCACG
CTCACCTACA CCTTCGTGGA GAGCGTGAAG GCCACCTTCC CGTTCTACGT GGTGCGGCTG
GCCGGCGGCC TGCTGTATCT GGCCGGAATG CTGGTGATGG CATGGAACGT GTGGATGACC
GTCATCTCCG GGCGCTCCAT GCAGGCCGCC ATTCCGCCCG TTGCCATTGC CCATGCCTGA
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| Protein sequence | MQEPHPPAAV YDDTAVRQLA LMSVVWGVVG MLVGVIIATE LAWPEFSLGI PWLSYGRLRP
LHTNAVIFAF GGCALMATSF HVVQRTCQVR LFAPALASFV VWGWQAVIVA AAISLPLGYT
TGKEYAELEW PIDILIAVVW VAYAVVFFGT IGMRRVRHIY VANWFYGAFI IAVALLHIVN
SAEIPAGWMK SYSAYAGVQD AMVQWWYGHN AVGFFLTAGF LGMMYYYIPK QAGRPVYSYR
LSIVHFWALI FTYMWAGPHH LHYTALPDWT QSLGMVFSLI LLAPSWGGMI NGVMTLSGAW
HKLRTDPILR FLIVALSFYG MSTFEGPMMS IKTVNALSHY TDWTIGHVHS GALGWVGFIT
MGSLYYLIPR MYGRTAMFSV KAIEAHFWMA TIGIVLYIAA MWIAGVMQGL MWRAINPDGT
LTYTFVESVK ATFPFYVVRL AGGLLYLAGM LVMAWNVWMT VISGRSMQAA IPPVAIAHA
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