| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2796 |
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| Symbol | |
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| ID | 7971009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2940336 |
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| End bp | 2941445 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793382 |
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| Product | CMP/dCMP deaminase zinc-binding |
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| Protein accession | YP_002944683 |
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| Protein GI | 239815773 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0590] Cytosine/adenosine deaminases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.15337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACTG AGCCCGCTGC CAAGCCCATG GACGATGCGC ACTGGATGGC GCTCGCGCTG
GCCGAGGCGC GCCTGGCGGC CGAGGCGGGC GAGGTGCCGG TCGGCGCGGT GCTGGTCAGG
AACGGGCAGT TCGTGGCCAG CGGGCGCAAC ACGCCGGTCG CGCAGCACGA CCCGAGCGCC
CATGCCGAGA TCAACGCACT GCGCGCCGGC GCCGCCGCGC TCGGCAACTA CCGGCTCGAC
GGCTGCGAGC TGTTCGTCAC GCTCGAGCCC TGCGCCATGT GCGCGGGCGC CATGCTGCAT
GCGCGGCTCG CGCGCGTGGT GTTCGGTGCG GCCGACCCCA AGACCGGCGC GGCCGGCTCG
GTGCTCGACC TCTTTGCCGA ACCCCGGCTC AACCATCGCA CCCAGGTGCA GGGCGGCGTG
CTGGCCGCGG AGTGCAGCGC ACTGCTGCAA GGCTTCTTCC AGCTGCGCCG CGATGCGGCG
CGCGAGCAGG CCCAGCCCCT GCGCGACGAT GCGCTGCGCA CACCGCCCGA GCGCTTCGAT
GCGCTCGCCG GCTACGCCTT CGAACCGCGC TACGTCCACG ACCTTCCCAG CCTGCAGGGC
TGGCGCATGC ACTACCTCGA CGAAGGGCCG CAAGACGGCT CGGCCGCCGC GTGCCTCTGC
CTTCATGGTC CGGGCGAATG GGGCTACTTC TTTCGCCGCC TCGTCGGCGC ACCCGGGCTG
CGCACGCTGG TGCCCGACCT GATCGGCTTC GGCAAGAGCG ACAAGCCCAA GCGCGAGGCG
GCGCACCGCA TCGAATGGCA CTGCCAGGTC CTGGACGAAT GGCTCGACCG CCTGCAGCCA
CCGCCGATGG TGCTGGTGCA CAGCGCCGCG GCCACCGGCC TGGCCACGCG GCTGCATGCC
GAAAAGGGCG GCCTGTTTGC AGCCGTGCTG CTCGCGCCCG AAGGCGGCGA GCCGGTGAGC
GATGCATGGC GCGCGCCGTT CCCCGACCGC GGCTACCAGG CCGCGCTGCG TGCGCTCGGC
CCCATCGCGT CGTCGTCCGG CCCGAATGCG CAACAGGCTG CGCTGCTCGC CCAGGCGGTG
CGCAACGCAA TGGGATACTC GACGCCGTGA
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| Protein sequence | MTTEPAAKPM DDAHWMALAL AEARLAAEAG EVPVGAVLVR NGQFVASGRN TPVAQHDPSA
HAEINALRAG AAALGNYRLD GCELFVTLEP CAMCAGAMLH ARLARVVFGA ADPKTGAAGS
VLDLFAEPRL NHRTQVQGGV LAAECSALLQ GFFQLRRDAA REQAQPLRDD ALRTPPERFD
ALAGYAFEPR YVHDLPSLQG WRMHYLDEGP QDGSAAACLC LHGPGEWGYF FRRLVGAPGL
RTLVPDLIGF GKSDKPKREA AHRIEWHCQV LDEWLDRLQP PPMVLVHSAA ATGLATRLHA
EKGGLFAAVL LAPEGGEPVS DAWRAPFPDR GYQAALRALG PIASSSGPNA QQAALLAQAV
RNAMGYSTP
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